Shewanella denitrificans: Sden_2436
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Entry
Sden_2436 CDS
T00344
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdn03009
]
Sden_2436
Enzymes [BR:
sdn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Sden_2436
Ribosome biogenesis [BR:
sdn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sden_2436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
HEAT_EZ
Motif
Other DBs
NCBI-ProteinID:
ABE55716
UniProt:
Q12LG0
LinkDB
All DBs
Position
complement(2901927..2902799)
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AA seq
290 aa
AA seq
DB search
MSEKLQKVLARAGHGSRREMEAWIAAGRVSVDGEIATLGDRVEVDAKIRIDGRTTSIKTA
DDMICRVLAYHKPEGEICSRKDPEGRPTVFERLPKIRDSRWVAVGRLDINTSGLLLFTSD
GDLANRLMHPSNEVEREYAVRTFGQVTDANVQSLRTGVMLEDGPAQFDTIKPAGGEGINS
WWHVTLKEGRNREVRRLWESQEIQVSRLIRVRYGMVELPKTLPRGGWIELPLDQVNYLRQ
LAGLEAETRSMLGSDKHSVARSKVKSSKIRRAVQKHKVISSRAKPSRQRD
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaattgcagaaagtcttggcccgtgcaggccatggctcccgtcgtgagatg
gaggcatggattgctgcaggccgagttagtgtagacggtgaaattgcaaccttaggtgat
cgcgttgaagttgacgctaaaattcgcatcgatggtcgcacaacttccattaaaaccgcg
gatgatatgatctgtcgtgttttggcttaccacaagccagaaggcgagatctgtagccgt
aaagatccagaaggtcgtccaacggtatttgagcgtctacctaaaattcgcgattctcgc
tgggttgcagtaggccgtttggacattaacacctcaggcttgttgttattcacctctgat
ggcgatcttgccaaccgtttgatgcacccatccaacgaagttgagcgtgaatatgcggtg
cgtacctttggtcaagtgactgatgccaacgtgcagtcattgcgcacaggcgtgatgctt
gaagatggcccagcgcagtttgataccatcaagcctgcgggcggtgaggggattaactct
tggtggcatgtgacccttaaagaaggccgtaaccgcgaggttcgacgtctgtgggaatct
caagaaatccaagtgagtcgtcttatccgagtgcgctatggcatggttgaattacctaag
acattgcctcgtggtggctggattgagctgccattagatcaagttaactacttacgtcag
ttagcgggtctagaagcggaaactcgcagtatgctaggttctgataagcacagtgttgct
cgctctaaagtgaagagttcaaaaattcgccgtgcagtgcaaaagcataaagtgatttct
agccgagctaagccaagccgtcagcgggactaa
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