Shewanella denitrificans: Sden_2485
Help
Entry
Sden_2485 CDS
T00344
Name
(GenBank) Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein
KO
K19229
cationic peptide transport system ATP-binding protein
Organism
sdn
Shewanella denitrificans
Pathway
sdn01503
Cationic antimicrobial peptide (CAMP) resistance
sdn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Sden_2485
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Sden_2485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdn02000
]
Sden_2485
Transporters [BR:
sdn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
Sden_2485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
ABE55765
UniProt:
Q12LB1
LinkDB
All DBs
Position
2962584..2963594
Genome browser
AA seq
336 aa
AA seq
DB search
MPLLDIRNLTIELNTNNTKVKVLEKVSLTLNAGEIHGLVGESGSGRSLLAKAILGALGPQ
WTVIADRLMLDGKNLLDMSPKQRRCLMGSDIAMIFQDPSGSLDPVKTIGSQLIESMTPNK
AVAFWRRGKDTYLNALKWLHKVGIKNPKSLMSCYPWELSEGECQKVMIAMAIANRPKLLI
ADEPTNSVELNAQAQIFRLLSQLNQLQNVSILLISHELETLVQWCDHLTVLYGGQVMESG
PTDEMIAHPFHPYTKALLKNLPDYTGKMRHKSYLPTLQGSSPSLHNMPAGCRLGPRCPEA
QRNCVKQPALEHQKDRYFACHFPYLNEQDTDDDAIA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgccattactcgacatacgcaacctcaccatagaactcaacaccaataacacgaaagtg
aaggtgctagagaaagtgagcttgaccctgaatgccggcgaaattcatggcctagtgggg
gagtctggctcagggcgcagtttgctcgccaaagccatcttaggcgcccttggtccccag
tggacagtgatagccgacagattaatgttagatggaaaaaacttactcgacatgagcccc
aaacagcgtcgctgcttgatgggcagtgatattgcgatgattttccaagacccttctggc
agtttagatccggtgaaaaccattggcagtcagctgattgaatccatgacgcctaataaa
gccgtggctttttggcgccgaggcaaagacacttaccttaacgcacttaaatggctgcat
aaggtgggcattaagaatccaaaatctttgatgtcctgctatccgtgggagctgtccgaa
ggagagtgtcagaaagtcatgattgccatggcgatcgccaatcgacctaaattattgatc
gccgatgaaccgaccaactcggttgagcttaatgctcaggcacaaattttcagattatta
tcccagctcaatcaactgcaaaatgtgtcaattttgctcatcagccatgagctggaaacc
ttagtgcaatggtgcgatcacttaactgtgctctatggcggtcaggtcatggagtcagga
cccacagatgagatgatagcccatccgtttcatccttatactaaagcgctcctgaaaaac
ctgcccgattacacaggtaaaatgcgacataaatcctatttaccgacactgcagggctca
tcgccttccttgcacaatatgccagcgggctgccgcttagggccacgatgccctgaggct
cagcgaaattgcgttaagcaacccgctcttgagcatcaaaaagaccgctactttgcgtgt
catttcccctatctaaatgagcaggataccgatgacgacgccattgcttaa
DBGET
integrated database retrieval system
