Shewanella denitrificans: Sden_2489
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Entry
Sden_2489 CDS
T00344
Name
(GenBank) transcription activator, effector binding
KO
K13652
AraC family transcriptional regulator
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdn03000
]
Sden_2489
Transcription factors [BR:
sdn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Sden_2489
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GyrI-like
HTH_18
Cass2
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ABE55769
UniProt:
Q12LA7
LinkDB
All DBs
Position
complement(2967046..2967939)
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AA seq
297 aa
AA seq
DB search
MNMMEDYQQKFERVLSHIDEHLSKPLAVDTLIAIAGLPQTQGQGHFLRLFSAMYGIELID
YINLLRDLQSVFELAYRPNISMADIASNASFQCPKAFSEDFNARNGMTPEAFRLKPEWNA
WFEKQAALDTMRTPNLASNDIHHKVTLVDLASIELAVVEHSGPVSNLHGSLQAFIGWRRA
MHTPPLVSRSFNLVYHDVKHVPASEYRLDIGAEIGRPLTAQDVGMVSKQLPKGRYALLAH
TGNEASLGEAINDLYGQWLVNSGEPLADFPLVLERVTQFPDVAQHKAVTHIYLGLKT
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgatggaagattatcaacaaaagtttgagcgggtgctaagccatattgatgag
catttgtccaagcccttggccgttgatactttgattgcaatcgcaggcttacctcaaact
cagggtcaagggcatttcctgcgcttgtttagcgccatgtatggtattgaacttatcgat
tacatcaacctacttagagacttacaatctgtgtttgagttggcttaccggccaaatata
tccatggctgatatagcatcaaatgccagctttcaatgccctaaggccttctctgaggac
tttaacgcaagaaacggcatgacacctgaagccttcaggttgaaacccgagtggaacgca
tggtttgaaaagcaagcggcattagacactatgcgtacgccgaacttagcctctaacgat
attcaccacaaagtgactttagtggacttagctagcatcgaacttgctgtggttgaacat
agtgggccggtatcaaatttacacggcagtttgcaggcttttatcggttggcgacgagca
atgcatacgccgccccttgtcagtcgcagctttaatcttgtttatcatgacgttaaacat
gtgccagcttctgagtatcgattggatattggcgccgaaatcggccggccattaacggcg
caggatgtgggtatggtaagtaaacagttgcccaaagggcgctacgcattacttgctcac
acaggcaatgaggcaagcctaggggaggcgataaacgacttatacgggcaatggctggtg
aacagcggcgagccgttagccgacttccccttagtgcttgaacgagtcacgcagttcccc
gatgtggcccaacataaagccgtcacccatatttatcttgggcttaaaacataa
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integrated database retrieval system
