Shewanella denitrificans: Sden_2492
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Entry
Sden_2492 CDS
T00344
Name
(GenBank) histone-like DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdn03032
]
Sden_2492
03036 Chromosome and associated proteins [BR:
sdn03036
]
Sden_2492
03400 DNA repair and recombination proteins [BR:
sdn03400
]
Sden_2492
DNA replication proteins [BR:
sdn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Sden_2492
Chromosome and associated proteins [BR:
sdn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Sden_2492
DNA repair and recombination proteins [BR:
sdn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Sden_2492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
VWA_3
Motif
Other DBs
NCBI-ProteinID:
ABE55772
UniProt:
Q12LA4
LinkDB
All DBs
Position
complement(2970743..2971015)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIEKIASGADISKAAAGRALDSFIAAVTEGLKDGDKISLVGFGTFEVRQRAERTG
RNPQTGKEIKIAAANIPAFKAGKSLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatctgaactaatcgagaaaatcgcatctggtgctgatatctctaaagcggca
gctggccgtgcactagattcttttatcgctgcagtgaccgaaggtctaaaagacggtgat
aaaatttctctagttggttttggtacattcgaagtacgtcaacgtgctgagcgtactggc
cgtaacccacaaacgggtaaagaaatcaaaattgctgcggcaaatattccagcatttaaa
gctggcaagtctttaaaagacgcagttaattaa
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