Shewanella denitrificans: Sden_2498
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Entry
Sden_2498 CDS
T00344
Name
(GenBank) cysteinyl-tRNA synthetase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sden_2498
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdn01007
]
Sden_2498
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdn03016
]
Sden_2498
Enzymes [BR:
sdn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
Sden_2498
Amino acid related enzymes [BR:
sdn01007
]
Aminoacyl-tRNA synthetase
Class I (G)
Sden_2498
Transfer RNA biogenesis [BR:
sdn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Sden_2498
Prokaryotic type
Sden_2498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
DALR_2
tRNA-synt_1g
CysS_C
tRNA-synt_1
tRNA-synt_1f
Herpes_U30
Motif
Other DBs
NCBI-ProteinID:
ABE55778
UniProt:
Q12L98
LinkDB
All DBs
Position
complement(2979361..2980740)
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AA seq
459 aa
AA seq
DB search
MLKIYNSMSREKQEFKPITPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYLGYE
VNFQRNITDVDDKIIKRAAENNESCDALTERLTAEMHKDFDALNMVRPDFEPKATLHMPE
IIEMVQRLLDRGHAYVAPDGDVLFSVASYKEYGRLSGQNIDQLQAGARVEIDHNKQNPMD
FVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNGKHLGTHFDIHGGGSDLQFPHHENEIA
QSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLKHYDAQTVRYFLLSGHYRS
QLNYSEDNLKQARSALERLYTAFKDLDLTVTAAPADEYVTKFKSAMNDDFNTPEAYSVLF
DMVREINRLKTTDMGAASALGVSMKQLADVLGIVSVDIETFFKGSGSDDEVAEIEALIVE
RNRARTEKDWAAADVARDRLNQLGVVLEDGENGTTWKKK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagatttacaatagcatgagccgcgagaaacaagagtttaaacctattacccct
ggtaaaattggcatgtatgtttgtggcataactatttacgatttatgccatattggccat
ggtcgtacttttgtatcttttgacatgatcgtacgttatctacgttacctaggttacgaa
gtaaattttcagcgtaatattaccgatgtggatgacaagatcatcaaacgcgccgctgaa
aataatgaatcttgtgatgcgttgactgagcgtttaaccgctgaaatgcataaagatttt
gatgcgcttaacatggtcaggcctgattttgagccgaaagcgaccttgcatatgcctgaa
atcattgagatggtgcagcggttactagaccgtggccatgcttatgttgctcccgatggt
gacgtgttattcagtgtggcgtcctataaagagtatgggcgtttatctgggcagaatatt
gaccaacttcaagcgggtgcacgcgttgaaattgatcataacaaacaaaacccgatggat
tttgtgctgtggaaaatgtcaaagcctggcgagccaacctgggagtcaccttggggagcg
ggtcgtccaggatggcacattgaatgttcagcgatgaacggtaagcacttaggtacccat
tttgacattcatggcggcggctcagacttacagtttccccatcatgagaatgaaatcgct
caatcttgctgtgcccatgacaccccttatgtgaactattggatgcacacaggcatggtg
atggttgaccgtgaaaaaatgtctaagtcgttaggtaactttttcaccattagggacgta
cttaagcattatgatgcgcaaaccgtgcgttacttcttgctatctggacattatcgcagc
cagcttaactactctgaagacaaccttaagcaggcgcgttcagcactagagcgtttatac
acagcgttcaaagatttggatttaactgtaaccgcagcgcctgccgatgagtatgtgact
aagttcaaatctgccatgaatgatgactttaataccccagaagcctattcagtgttgttt
gatatggtgcgtgaaattaaccgcttaaaaaccacggacatgggtgccgcatcggccctt
ggggtgagcatgaagcagcttgctgatgtacttgggattgtcagtgtagatattgagacc
ttctttaaaggcagtggcagcgatgatgaagtggctgagattgaagcgctgattgtcgag
cgtaaccgtgcccgtactgaaaaggactgggctgcggccgatgtggcgcgcgatcgtcta
aatcagctaggtgtggtgcttgaagacggtgaaaatgggactacttggaaaaagaagtag
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