Shewanella denitrificans: Sden_2516
Help
Entry
Sden_2516 CDS
T00344
Name
(GenBank) Chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdn03036
]
Sden_2516
Chromosome and associated proteins [BR:
sdn03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
Sden_2516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_23
AAA_29
SMC_hinge
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ABE55796
UniProt:
Q12L80
LinkDB
All DBs
Position
complement(3003236..3006652)
Genome browser
AA seq
1138 aa
AA seq
DB search
MRLKQIKLAGFKSFVDVTKIPFEQQLSAIIGPNGCGKSNIIDAVRWVLGESSAKNLRGDS
MTDVIFNGSSVRRPVSVAGVELVFDNSLGRLAGQYASYQEISVKRQVSRDGDSFYFLNGQ
KCRRKDITDLFMGTGLGPRSYAIIEQGTISRLIESRPQDLRVFIEEAAGISRYKERRKET
ENRIRHTRDNLERLNDIRLELGSQLDKLAEQAKSALAYREFKQQERQLQAQLLVVRYQEL
ALNTEKIDKEIQLLELELAEINAAAQAASLSLLQWQTQLAELNEQEQQQVEHFYQSRTDI
AKCEQALHHWQTQHSQWQQQKQALTTQLAQTAQDNVQGENELQRLEADHVQQHTVWEASQ
YALEILDEQINQLEESSDALNENLSRCQETLANAKMAHAVENAKREHTQKNLLHAEHKLT
ELANELETLQAIDNSDARLQLSQALSDNAKALSQQTLLSAEHEHSMQAQEQALNDKLAHH
QQLTTTLTSAKARHQVIEEWLAGEQESDGSQLLWQHIKVTPGWELAVELALQPVLQANVL
QGESKAGFIHSAEYESNHQAFSAAVNLTPWTERLIWVEDLAYAKAHLNELKPQQCFVSRD
GYLLGHGFLLQAQSQKQSNLLLTQELNQLSSQISRLASEVELSEQQVLDARNNLAEVKLL
ALECQRQGHALALKKQALSSEMAKLLHQDDAKETNLAKIASSQAQLEQQREDSQVQLLAL
MTLLDSQDDELQGLSKKQQELNQEWLSVSAQLRQAKAQRIEQDNIKRQHEHARQTLSTQV
ALQQQTLQQIALKRQELNHSLAQLEQASRQQQSSQEQDQQALLEQNLATLLQTQAQQQGL
LNDTRAKQAQVQIELDNVLLTQKQQLGIIEGLTQKIGALKLRREGFKGQADGQQQLLDEH
KVDVSAVARQLKPDVKTQQLSNELDKLRAEILKLGAINLAAIEEYEVQEQRKAYLDAQDE
DLNKGLMILEDAIRKIDKETRSRFKATFEAVNKDLGLLFPKVFGGGQAYLALTEDDLLET
GVTIMAQPPGKKNSSIHLLSGGEKALTALSLVFAIFRLNPAPFCMLDEVDAPLDDANVER
FCRLLQEMSQSVQFIYISHNKITMEMADQLIGVTMHEPGVSRIVAVDIEQAVAMADAL
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgagattaaaacagataaaacttgctggatttaaatcctttgtcgatgtgaccaaaatt
cccttcgagcagcaactctcagcgattattggtccgaatggttgcggtaaatccaacatc
atagacgcggtgcgctgggtgcttggggaaagctcggccaagaatcttcgcggcgattcg
atgacagacgttatcttcaatggctcgagtgtgcgcaggccagtctctgtggctggggtt
gaactggtgtttgacaacagcctagggcgactcgctggtcagtatgccagttatcaggaa
atttcggttaagcgtcaggtgagccgtgatggcgacagcttttactttctcaatggacaa
aagtgtcgccgcaaagacattaccgacttgtttatgggcacaggccttgggccacgcagt
tatgccatcatagaacagggcacaatttcacgcttaatagaatctcggccgcaagatttg
cgggtatttatcgaagaagctgcgggtatttctcgttataaagaacgccgtaaagagaca
gagaatcgcattcgccatacccgagataatttagaacgcttaaatgatattcgactcgaa
cttggcagccaacttgataaattggctgaacaggctaagtcggcgctcgcttatcgcgag
ttcaaacaacaagaacgtcagctacaggcacagttgttggtggtgcgttatcaagagtta
gcacttaacactgagaaaatagataaagaaattcagctgcttgaacttgaacttgccgaa
attaatgcggcggcacaagcggcatccctgagcctactgcaatggcaaactcagttagcc
gagcttaacgaacaagagcagcagcaagtcgagcatttttatcagagtaggactgatatc
gccaaatgcgagcaggccctacatcattggcaaactcaacatagtcagtggcaacagcaa
aaacaggcattaaccacccagcttgcgcaaaccgctcaagataacgttcaaggtgaaaac
gaactgcaaaggctagaagccgatcacgttcagcaacacactgtgtgggaggcgagtcag
tacgccttagaaatactcgatgaacaaataaaccaactggaggagtccagtgacgcgctt
aatgaaaacttaagccgctgtcaggaaacgttagccaacgcaaaaatggctcatgcagta
gagaatgccaagcgtgagcacactcagaagaacttgttgcacgctgagcataaactcact
gagcttgctaatgaacttgaaaccctacaagccatagataacagtgatgctcgcctgcaa
ctaagccaagccttgagtgataacgccaaagccttgtcacagcagactttgcttagcgct
gagcatgaacattcaatgcaggcccaagagcaggcactcaatgacaaactcgctcatcat
caacagctgacaaccacactgacctcagccaaggcccgccatcaagtcatagaggaatgg
ctcgccggtgagcaagaaagtgatggtagccagttattgtggcagcatataaaagtgacc
ccaggttgggagcttgcggttgaattggcattgcaaccagtgttgcaggcgaacgtattg
caaggtgagtccaaggcagggtttattcattcagctgaatatgagtctaaccatcaagct
ttttcagcggcggtaaacttaaccccgtggactgagcgactgatttgggtggaagattta
gcttatgccaaggcacaccttaatgaacttaaaccgcagcaatgctttgtcagtcgtgat
gggtatttattgggccatggcttcttactgcaagctcaaagtcagaaacaatctaatttg
ctcctgactcaagagcttaatcagctctcatcccagataagtagactagcttcagaggtt
gagcttagcgaacagcaagtgctggacgcgagaaacaatcttgcagaggtaaagttgctg
gcactcgagtgtcaacggcaagggcatgcgcttgcgctaaagaaacaagccttatcctct
gagatggcaaaattgttacatcaagatgacgccaaagagacaaatctggcaaagatagcg
tcatcccaagcccagcttgaacaacagcgtgaggatagccaagtgcagctattggcattg
atgacgctattggacagtcaagatgatgagttacaaggattatcaaaaaaacaacaagag
cttaatcaagagtggctgtcagtgagtgcccagttaaggcaagctaaagcgcagcgcatt
gagcaagataacatcaagcgtcagcatgagcatgcccgtcaaaccttgagcactcaagtg
gcgctgcagcaacaaacactgcaacaaattgcacttaagcggcaggagttgaaccacagc
ttggctcagcttgagcaagccagtcgccaacagcaaagcagtcaagagcaagaccaacaa
gcgctgcttgaacagaatcttgcgaccttactccagactcaggcgcagcagcaggggctg
ctcaatgatacgcgtgctaaacaagcacaagtgcaaatcgagctagataatgtactatta
acgcaaaaacaacagcttggtatcatagaaggcttgactcaaaagataggcgcgttaaag
ttacgtcgtgagggttttaaaggtcaagcggatggccaacagcaattgctcgatgagcat
aaagtggatgtgtctgctgtcgcgcgtcaactcaagccagatgtgaagacgcagcagtta
agtaatgagctagataagttgcgggcagagatcctaaagttgggtgccattaaccttgcc
gctatcgaagaatatgaagtacaagagcagcgtaaggcctatttggatgctcaagatgag
gatctcaataaagggttaatgatcctcgaagatgccattcgtaagattgacaaggaaacc
cgcagccgcttcaaggccacgtttgaggccgtgaataaagatttaggcttgttatttcct
aaagtgtttggcggtggtcaggcatatttagcgttaacagaagatgacttactggaaact
ggcgttaccattatggcgcagccaccaggaaagaagaacagcagcattcatttattaagc
ggtggagaaaaagccttaaccgcattatcattggtgttcgccatctttaggctgaatccg
gcacctttttgcatgctagatgaagtcgatgcgccacttgatgatgccaacgtagaacgt
ttttgccgtttattacaagaaatgtcccaaagcgtgcagtttatatacattagccataat
aaaataaccatggaaatggcagatcaattaattggcgttactatgcatgaacccggcgtt
tcacgtatagttgctgtggatatagaacaagcggtcgccatggcggacgcgctataa
DBGET
integrated database retrieval system
