Shewanella denitrificans: Sden_2521
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Entry
Sden_2521 CDS
T00344
Name
(GenBank) Methionine gamma-lyase
KO
K01761
methionine-gamma-lyase [EC:
4.4.1.11
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00270
Cysteine and methionine metabolism
sdn00450
Selenocompound metabolism
sdn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Sden_2521
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Sden_2521
Enzymes [BR:
sdn01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.11 methionine gamma-lyase
Sden_2521
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Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
GDC-P
SelA
Motif
Other DBs
NCBI-ProteinID:
ABE55801
UniProt:
Q12L75
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Position
complement(3011546..3012718)
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AA seq
390 aa
AA seq
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MQDKWKSATVAIHGGHQREAFGALVTPLYQSATFAFETAEQGGARFAGDEPGYIYTRLGN
PTTAELERKMALLEGADDAAATASGMAAVSAALLTHLEQGDHLIASKAVYGCTYALITTQ
LSRYGISTSLVDFSDMQAVEAAIKPNTRVLFCETPVNPHLQVFDLDAMAKVAKKHGLISI
VDNTFMTPLLQKPLAMGIDMVIHSATKYLNGHGDVIAGIVCGNSEHMHKLRYEILKDFGG
VMSPHDAWLILRGLKTLDVRLARHCDNAEILANYLVEHKAFSQVFYPGLSTHQGHAFIGK
QMKRAGGVIAFELKGDKQDAINFVNRLKLFTIAVSLGDAESLIQHPASMTHSPYTLEARM
EAGITDNLLRISVGLEDVQDLIADIEQALA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataaatggaagtcagcaacggttgcgattcatggtggtcatcaaagagaagcg
tttggggcgctggtgacacctttataccaaagtgccacctttgcgtttgaaaccgcagag
cagggcggagcgaggtttgctggggacgaacctggctatatttatactcgtcttggcaac
ccaaccacggctgaactcgaacgaaagatggcgctgctagaaggcgccgatgatgcggct
gcaacggcatctggcatggcggccgtgtctgctgcgctattgactcatctggagcaaggg
gaccatttaattgcctctaaagccgtgtacggttgcacctatgcgttgataaccacccag
ctttcccgctatggtatcagcacaagtttggtggattttagtgatatgcaagcggttgaa
gccgctataaaacctaacactcgggtacttttttgtgaaacgccggtgaatccccatcta
caagtgtttgatttagacgccatggcgaaagtggctaaaaaacatgggctgattagcata
gtggataacacctttatgacgccactgctgcaaaagccattggctatgggcatagacatg
gtgatccacagcgcgaccaaatatttaaacggccatggtgatgtgattgccggcatagtg
tgcggcaacagcgagcatatgcataaattgaggtacgagattttaaaagactttggcggc
gttatgtctccccatgatgcttggcttattctgcgagggcttaagactttagatgtgcgc
ttagcaaggcattgtgataatgccgaaatattggctaactacttggttgagcacaaggcc
ttttcccaggtgttctacccagggttaagtacccatcaaggtcatgcgtttattggcaag
caaatgaagcgtgctggtggcgtgatagcgtttgagcttaagggtgataagcaagatgca
attaactttgtcaatcgtttaaagctatttaccatagcggtaagtttaggtgatgctgag
tcattaattcaacatcctgcctccatgactcactcgccttataccttagaggccagaatg
gaagctgggatcactgataatttattgcgaatttcagtgggccttgaagatgtgcaagat
ttaattgctgatatcgagcaagcgttagcgtaa
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