Shewanella denitrificans: Sden_2544
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Entry
Sden_2544 CDS
T00344
Name
(GenBank) prolyl-tRNA synthetase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sden_2544
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdn01007
]
Sden_2544
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdn03016
]
Sden_2544
Enzymes [BR:
sdn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
Sden_2544
Amino acid related enzymes [BR:
sdn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Sden_2544
Transfer RNA biogenesis [BR:
sdn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Sden_2544
Prokaryotic type
Sden_2544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
tRNA_edit
HGTP_anticodon
TIR_2
Motif
Other DBs
NCBI-ProteinID:
ABE55823
UniProt:
Q12L53
LinkDB
All DBs
Position
3041469..3043184
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AA seq
571 aa
AA seq
DB search
MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSWLPSGLRVLRKVEAIVREE
MNKAGAIEILMPLVQPADLWIETGRWEKFGPELLRFQDRHNRDFVLGPTHEEVITDLVRK
EVSSYKQLPLSLYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHLDQGTMDETYQAMFTA
YNNIFTRMGLAFRPVLADTGSIGGSLSHEFHVLANSGEDLIAYSTGSDYAANIEKAEAAI
PTQSRLAPSQAMSTIDTPNAKTIAELVEQFDLSITSTVKTLIVKGATEEQPLIALVIRGD
HELNEVKADKIDLVASPLEFASEAEIRAAIGAGPGSIGPVGLNIPVFIDHSVSVMSDFAA
GANQDDKHFIGINWERDLPLATAADIRNVVEGEATPDGLGTYAMARGIEVGHIFQLGTNY
SKAMNATVLDENGKSQVMLMGCYGVGVSRIVAAAIEQNHDDRGIMLPEALAPFTVGILPM
NMHKSHRVADIAEKLYQDLNDAGIEVLLDDRKERPGVMFADMELIGLPHVVVIGDRNIDA
GVFEYKNRRTGEKQDIPLDQIVDFLKSSLKA
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgagttagcaagtacctgctttcaacacaaaaagaaacacctgcaaatgcagaggtg
ataagtcatcagttaatgctgcgtgcgggtatgatccgccgtaatgcttcgggtctttac
agctggttgccgtctggtttacgtgttttacgtaaagttgaagctatcgtgcgtgaagaa
atgaacaaggctggcgccatcgaaattctgatgcccctagttcaacctgctgacttatgg
attgaaacgggtcgctgggaaaagtttggtcctgaactgctgcgcttccaagacagacac
aatcgtgattttgtccttggcccgacccatgaagaagtgatcacagatcttgtgcgtaaa
gaagtcagctcatataagcagctgcctttaagcctgtatcaaatccaaaccaagtttcgc
gatgaagtgcgcccacgttttggcgtaatgcgtgcccgtgaattcttaatgaaagatgcc
tactcgttccatttagatcaaggcaccatggatgaaacttatcaggcaatgttcacggcc
tataacaatattttcactcgtatgggacttgcattccgccctgtacttgctgacacaggt
tcaattggtggcagtctttcccacgaattccacgtgcttgccaacagcggtgaagactta
atcgcttactcgaccggtagcgattatgccgccaacatagagaaagcagaagcggcaata
ccaacacagtctcggctggcgccatctcaagcgatgagcactatcgatacccctaatgct
aagaccatcgccgagttagtcgagcagttcgatttaagcatcactagcacggttaagact
ttaatcgttaaaggggcgactgaagagcagccacttatcgccttagtcattcgcggtgac
cacgagcttaatgaagttaaagccgacaagattgacttagtggcctcaccactggagttt
gcatcagaagccgaaatacgtgctgccattggcgcaggtccaggttcaatcggccctgtt
ggtttgaatattccagtgtttatcgatcacagtgtcagcgttatgagtgattttgccgct
ggtgctaaccaagatgataaacattttattggtatcaactgggagcgcgatttaccactg
gcaacggctgctgacatccgtaacgttgtcgaaggtgaagccacccctgatggtttaggc
acttatgctatggctcgcggtattgaagtgggtcatattttccagcttggcaccaattac
tcaaaagccatgaacgccacagtattggatgagaacggaaaatctcaagtgatgctcatg
ggctgttacggtgtcggcgttagccgcatagtggcagcagcgattgagcaaaaccacgat
gatagaggcataatgctgcctgaagccttagcccctttcactgtgggcatattgccgatg
aacatgcacaagtctcatcgagtggctgacattgcagagaagctttatcaagacctaaat
gacgccggtatcgaagtgttactcgatgaccgtaaagagcgtcctggggtgatgtttgcc
gatatggaactgattggcttaccgcatgtggtcgtcattggcgatcgcaacatagatgct
ggcgtatttgaatataaaaaccgccgcacaggtgagaagcaagatattccattagatcaa
attgtcgactttcttaaatcttcattaaaagcttaa
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