Shewanella denitrificans: Sden_2561
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Entry
Sden_2561 CDS
T00344
Name
(GenBank) Isocitrate dehydrogenase (NAD+)
KO
K00030
isocitrate dehydrogenase (NAD+) [EC:
1.1.1.41
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00020
Citrate cycle (TCA cycle)
sdn01100
Metabolic pathways
sdn01110
Biosynthesis of secondary metabolites
sdn01120
Microbial metabolism in diverse environments
sdn01200
Carbon metabolism
sdn01210
2-Oxocarboxylic acid metabolism
sdn01230
Biosynthesis of amino acids
Module
sdn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sdn_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Sden_2561
Enzymes [BR:
sdn01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.41 isocitrate dehydrogenase (NAD+)
Sden_2561
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Gene cluster
GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
ABE55840
UniProt:
Q12L36
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All DBs
Position
3065895..3066905
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AA seq
336 aa
AA seq
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MSKRTITVIPGDGIGPSIIDSALKILDKAGCNFEYEFADAGLVALEKHGELVPQRTLDLI
EKNRITLKGPLTTPVGEGFTSINVSLRKKFGLYANVRPVLSFKGTQARYENIDIITVREN
TEGMYSGLGQKVSEDGETAEATSIITRQGAEQITTFAYELARKENRKKVTIVHKANIMKS
TSGLFLKVAREVSLRYPDITTEEMIVDATCMKLVMNPENFDVIVTTNLFGDILSDLCAGL
VGGLGMAPGANIGRDAAIFEAVHGSAPDIAGKNLANPTSVILASIQMLEYLGMADKAEMI
RSAVSAVIEEGDRTTRDLGGTHGTTDFTQAVLDRLV
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcgtacaataaccgtgatcccaggtgatgggattggcccgagcatcatagat
tcagcattaaaaatcctcgacaaagcaggatgtaatttcgaatatgaattcgccgatgca
ggccttgttgctctagaaaagcacggtgagctagtaccacaacgtacattagatcttatt
gaaaaaaaccgcatcaccctaaaaggcccgttaaccacgccagtaggtgaaggtttcact
tcaattaacgtaagtttacgtaaaaagttcggcctatatgccaacgtgcgcccagtcttg
tcttttaaaggcactcaggctcgctacgaaaatatcgacatcatcacagtgcgtgaaaac
accgaaggcatgtactcaggcctaggccagaaagtgtctgaagatggcgagacagcagaa
gccaccagtatcatcacgcgtcaaggcgccgagcagatcaccaccttcgcttacgagctc
gctcgcaaagaaaaccgtaagaaagtgaccatagttcacaaagctaacatcatgaagtct
acctcagggttattcttgaaagtggctcgtgaagtgagccttcgctatccagacatcacc
acagaagagatgatcgtcgatgcgacttgcatgaaacttgtgatgaacccagaaaatttc
gacgtgatagtgaccaccaacttattcggcgacattttatctgacttatgcgcaggtcta
gtgggcggtttaggcatggcccctggggcaaacattggtcgtgatgcggcaattttcgaa
gccgtacacggcagtgcaccggatatagcaggtaaaaatctagccaacccaacctcggtt
atcttagcgtctatccaaatgcttgaatatttaggcatggccgataaggcagagatgatc
cgcagcgccgtgtcggctgtgattgaagaaggcgatcgcaccacccgcgatttgggtggc
actcacggtaccaccgacttcactcaagcagtattagatcgtttagtctaa
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