Shewanella denitrificans: Sden_2571
Help
Entry
Sden_2571 CDS
T00344
Name
(GenBank) 1-Deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00730
Thiamine metabolism
sdn00900
Terpenoid backbone biosynthesis
sdn01100
Metabolic pathways
sdn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Sden_2571
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Sden_2571
Enzymes [BR:
sdn01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
Sden_2571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
TPP_enzyme_C
E1_dh
Transketolase_N
GpA_nuclease
Motif
Other DBs
NCBI-ProteinID:
ABE55850
UniProt:
Q12L26
LinkDB
All DBs
Position
3075452..3077320
Genome browser
AA seq
622 aa
AA seq
DB search
MSFDISKFPVLAKANTPEDLRKLPQNMLSQVSTELRQFLLQSVGNSSGHFASGLGTVELT
VALHYVYNTPFDRLIWDVGHQAYPHKIMTGRRDEMHTIRQKNGLHPFPWREESEYDTFSV
GHSGTSVSAALGMAIAADKEAAGRKVVAVIGDGAMTGGMVFEAMNHAGDLHKDMLVVLND
NEMSISENVGALNNHLAQLMSGRLYTTIREGSKKVLQGMPVIKEMAKRTEEHLKGMVVPG
TLFEELGFNYIGPIDGHDVDALVETMRNMRSLKGPQILHIMTKKGRGYEPAEKDPIGWHA
VPKFDPDQFKKPATKPGLPTFSQVFGKWLCDVAAQDDKLLAITPAMREGSGMVEFSQRFP
EQYFDAAIAEQHAVTLAAGFACEGFKSVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDR
GGIVGADGATHQGAFDLSFMRCIPNLVIMAPADENECRQMLYTGYRYQDGPTAVRYPRGF
ATGAEQIEQMTALPIGKGRVCRQGKKIAILNFGTTLASALEVAEQLDASVADMRFIKPLD
VDLLHTLALEHDVIVTIEENAIMGGAGSGVIEALHKLKICKPVLQIGLPDEFIKHGAPDE
IIAELRLDSKGILAQIQEYLSE
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgacatatctaaatttccagtattggctaaggccaatactcctgaagactta
agaaagctgcctcaaaacatgctttctcaagtctcgactgaattacgtcaatttttactc
cagtctgtgggtaattcaagtggacactttgcctctggcttaggaacagtcgaactcacc
gttgccttgcattatgtctacaatactccgtttgaccgcttgatttgggatgtgggccat
caggcctatccccataaaattatgaccggcagacgggatgaaatgcacaccataagacaa
aaaaatggcctgcatccttttccatggcgtgaagaaagtgagtacgacaccttcagtgtc
ggtcattctggcacctcagtcagtgccgccttaggcatggccatagcagcagataaagaa
gcggcgggccgcaaagtggttgccgttattggtgatggcgccatgacaggcggcatggtg
tttgaagccatgaaccacgctggtgacttacataaagacatgttagtggtgctcaatgac
aatgaaatgtcaatttcagaaaacgttggtgctctgaacaatcacctcgctcagctgatg
tcaggcaggttgtacaccacaatacgtgaaggcagtaaaaaagtcttacaaggcatgcct
gtcatcaaagaaatggccaagcgtaccgaagaacaccttaaaggcatggttgtccctggc
accttgtttgaagaattgggatttaactatattggcccaatcgatggccatgatgtggat
gccttagtggaaaccatgcgtaatatgcgcagccttaaaggcccacaaatcctgcacatt
atgaccaagaaaggtcgcggctatgagccagcggagaaagatcccatcggctggcatgct
gtgccaaaatttgacccagatcagtttaaaaaacccgcaaccaagccaggtttaccgacg
ttttctcaggtgtttggtaaatggttatgtgatgttgctgcccaagatgacaagctgctt
gccattaccccagccatgcgcgaaggctcaggtatggtggagttttcccagcgttttcct
gagcaatatttcgatgcggccatcgcagagcagcatgcggtaaccttagcggcaggcttt
gcctgtgaaggctttaaaagcgtggtggcaatttattcaaccttcttgcagcgcggttac
gatcagctcattcatgatgtagcgctgcagcgtttacctgtgctatttgccatagatcgc
ggcggcatagttggcgccgatggggccactcatcaaggtgcattcgatttaagctttatg
cgctgcattcccaatttagtcatcatggcgccagccgatgaaaatgaatgccgtcagatg
ctgtacactggctatcgttatcaagatgggccgacagcggtgcgctatccaaggggcttt
gccactggggctgaacaaattgaacaaatgaccgcccttcctataggaaaaggtcgcgtc
tgtcgtcaaggaaagaagattgccatcttaaactttggcaccaccttagcgtctgcctta
gaggttgccgagcagctcgatgccagcgtcgccgacatgcgttttatcaaacctttggat
gtggatttattgcatactttggcgcttgagcatgatgtgattgtcaccattgaagaaaat
gccattatgggcggcgcaggctctggggtaatcgaggccttgcataagcttaaaatctgc
aaacctgtgctacaaattggtttgccggatgaatttattaagcacggcgcaccggatgaa
atcatcgctgaactcaggttagattcgaaaggtatcctcgctcagatccaagagtacttg
agtgaatag
DBGET
integrated database retrieval system
