KEGG   Shewanella denitrificans: Sden_2640
Entry
Sden_2640         CDS       T00344                                 
Name
(GenBank) SSU ribosomal protein S6P modification protein
  KO
K05844  ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
sdn  Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:sdn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sdn03009]
    Sden_2640
Ribosome biogenesis [BR:sdn03009]
 Prokaryotic type
  ribosomal protein modification factors
   Sden_2640
SSDB
Motif
Pfam: RimK Rimk_N GSH-S_ATP ATP-grasp_3 ATPgrasp_ST Dala_Dala_lig_C
Other DBs
NCBI-ProteinID: ABE55919
UniProt: Q12KV7
LinkDB
Position
complement(3170174..3171079)
AA seq 301 aa
MHIAIMSRNKNLYSTRRLKEAAIARGHDVKVVDHISCYMNINMTSPSIHMKGVELPKFDA
VIPRIGASVTFYGTAVLRQFEMMGVHPLNESVAITRSRDKLRSLQLLSRKSIGLPVTGFA
NKPSDVPDLLDMVGGAPCVIKLLEGTQGIGVVLAETRKAAESVIEAFMGLKANIMVQEYI
KEAGGADIRCFVIGDKVIAAMKRQALPGEFRSNLHRGGSATIVKLTPEERSTALRAAKTM
GLNVAGVDILRSKHGPLVMEVNSSPGLEGIEKATGIDVADKIIQFIEKNVKATSTKTKGV
G
NT seq 906 nt   +upstreamnt  +downstreamnt
atgcatatcgctattatgtcacggaacaaaaatttgtattcgacacgtaggctcaaggaa
gcggctattgctcgtggccatgatgtcaaagtggttgaccatatcagctgctacatgaac
atcaatatgacctctccaagcattcatatgaaaggcgtcgagttgccaaaatttgatgcg
gttattccacgtattggggcttcggtgaccttctacggtactgcggttctgcgccagttt
gaaatgatgggggtgcacccgcttaacgagtctgtggctatcacgcgttcacgtgataaa
ttgcgttcattgcagttgttatcgcgtaaaagcataggcttacccgtaacaggttttgcg
aacaagccttctgatgtgcctgatttattagacatggttggcggcgcgccttgcgtaatc
aaactacttgaaggcacccaaggtattggtgtggtgctggccgaaactcgcaaagcggca
gaatctgtgattgaagcctttatgggccttaaggccaacatcatggtgcaagaatacatc
aaagaagcgggcggcgcagatattcgctgtttcgtcattggcgataaagtgattgccgcc
atgaagcgtcaagctttgcctggtgaattccgctctaacctgcatcgcggtggcagcgct
acgattgttaaattgactccagaagagcgctcaaccgcccttcgtgcagccaagaccatg
ggcttaaatgttgctggtgttgatattttacgctccaaacacggcccactagtgatggaa
gttaactcatccccaggccttgaaggcatcgaaaaagccacagggattgacgtggccgat
aagattattcagtttatagaaaaaaatgtaaaagcgaccagcactaagaccaagggagtc
ggttaa

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