Shewanella denitrificans: Sden_2645
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Entry
Sden_2645 CDS
T00344
Name
(GenBank) polysaccharide biosynthesis protein CapD
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00541
Biosynthesis of various nucleotide sugars
sdn00552
Teichoic acid biosynthesis
sdn01100
Metabolic pathways
sdn01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Sden_2645
00552 Teichoic acid biosynthesis
Sden_2645
Enzymes [BR:
sdn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
Sden_2645
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
RmlD_sub_bind
CoA_binding_3
GDP_Man_Dehyd
NAD_binding_4
3Beta_HSD
KR
adh_short
PglD_N
NAD_binding_10
Methyltransf_14
Motif
Other DBs
NCBI-ProteinID:
ABE55924
UniProt:
Q12KV2
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Position
complement(3175532..3177481)
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AA seq
649 aa
AA seq
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MIGLKMDFLQSMFSLKRAHKRAVSVTIDSLFLCVAFWAALLVRVDDVNVLVNSQYWLLLI
LVVPLSIIGFIKFGLYRAVLRYMGLQALTAILLGVIISTIALVLIAYYTDAQLPRTVPII
YAAFALVFVGGTRAMVRSLVGSGMKRNGEPVIIYGAGVSGRQLVMALVQSHEYYPFAFVD
DDEAVQGSVIQGVHVHSPSIIKKLIKQKAATKVLLAIPSASRSRRQEILLQLEPLSVQVL
TLPAMADLVSGNKLYSDIKEVEIDDLLGRDSVTPRQDLLTANIKDKVVMVTGAGGSIGSE
LCRQILKQAPKKLVLFELSEFALYAIESELTATAIELGLTVRILPMMGSVQKENRVQAVM
EAFGVQTVYHAAAYKHVPLVEHNVVEGVRNNVFGTLYTARAAIKAKVETFVLVSTDKAVR
PTNVMGTTKRMAELVLQAFAKEKHSTRFCMVRFGNVLGSSGSVVPLFRKQIANGGPVTVT
HPEITRFFMTIPEASQLVIQAGAMGKGGDVFVLDMGKSVKIVDLATKMIRLSGFEVKNEL
NPDGDVAIEFTGLRPGEKLYEELLIGDDVTGTEHERIMTANELYLSWANYSAILDKLDLA
CHEFDHERIRAILLSTPTGFAPTDGICDLLFQQREKISGTKKNVVNFVL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgattgggcttaaaatggattttttacaaagcatgtttagcttaaagcgtgcccataag
cgtgctgtgagcgttacgattgactctcttttcctgtgtgtcgcattctgggcagcgtta
ttagttagagttgatgatgttaatgtgttggttaattcacaatattggctattacttata
ttggtcgttcccttaagtatcataggctttatcaaatttggtctatatcgcgcagtgctt
aggtacatggggttacaagcactcacggccattttattaggcgtaataatctctacgatc
gccttagtgttaattgcttattataccgatgcacaactcccaagaactgtgcctatcatt
tatgctgcgtttgcattagtttttgtgggcggcactcgtgctatggttcgctctcttgtt
ggctctggcatgaagcgtaatggtgagccggtaatcatttatggtgcaggagtgagtggt
cgccaactggttatggcattggtgcaaagccatgagtattatccctttgcttttgttgat
gatgatgaagccgtacaaggttctgttattcagggagtacatgttcattctccttctatc
attaaaaagttaattaagcagaaagcggcaacaaaagtattattggcaattcctagcgct
tctagatccaggcgacaggagatattacttcagttagagccattatcggtacaagtactc
actttgcctgcgatggctgatctggttagtggtaataagctctatagcgacattaaagaa
gtcgaaatcgatgacttattaggccgtgattcggtgactccaaggcaagatctattaacc
gcgaacattaaagataaagtcgtcatggtaactggcgctggcggttctattggttcagaa
ctctgtcgtcaaattttaaagcaagcgcctaaaaagttagttctctttgagctgtctgaa
tttgcgctctatgccatcgaatcagaactaacagctacagcgattgaattagggttaaca
gtacgcattttacctatgatgggctcggtacaaaaagagaatcgggttcaggcggtaatg
gaagcatttggggtacaaaccgtataccacgcagcagcctataagcatgtccccttagtt
gagcacaatgtggtagaaggcgtacgtaataatgtatttggtaccctgtatactgcaaga
gccgcgattaaagctaaggttgagacattcgtgcttgtatcaacggataaagccgtgcga
cccaccaatgtgatgggtaccactaagcgtatggctgagctggtattgcaggcttttgcc
aaagagaaacacagtacgcgtttttgcatggtgcgttttggcaatgtactcggctcatca
ggctctgtagtgcctttatttcgcaaacaaattgctaatggcggccctgttactgtcacg
caccccgaaattacccgcttctttatgacaatacccgaagcctctcaacttgttatccag
gccggcgctatgggtaaaggcggagatgtgtttgtactggatatgggaaagtcggttaaa
attgtcgatttagccactaaaatgatccgtttaagcggctttgaagtgaagaacgaatta
aatcctgatggtgatgtggccatagagtttacgggtttacgtccaggcgaaaaactctat
gaagagttgcttattggtgatgatgtcactggcaccgagcacgaacgtatcatgactgcc
aacgaattgtatttaagctgggctaattattcagctattttggataaattggatttagcc
tgtcatgagtttgatcatgagagaattcgcgcaattctgttaagcaccccaacaggcttt
gcccctactgatggtatttgtgatctgttgtttcagcagagagaaaaaatatctggtact
aaaaagaatgtggtgaatttcgtattatga
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