Shewanella denitrificans: Sden_2709
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Entry
Sden_2709 CDS
T00344
Name
(GenBank) transcriptional regulator, LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdn03000
]
Sden_2709
Transcription factors [BR:
sdn03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Sden_2709
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
TnsD
PDH_C
HTH_3
Crp
TNFR_c6
Motif
Other DBs
NCBI-ProteinID:
ABE55988
UniProt:
Q12KN8
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All DBs
Position
3246554..3247597
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AA seq
347 aa
AA seq
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MIRLIKSLFYMKATINDVAKFAGVSIKTVSRVTNKEPSVKQTTIDKVNQAIATLNYQPNL
AARNLASTSSYVIGFIYDNPNAYYIIDMQNGILSACKERGFELLIHPCNAKSDTICEELT
AMVKHSRLAGLVLTPPMSENPNILAALDSIKANYVRIIAGENNSQSNGLTVLVNDKHGAV
AITQHLIDLGHRNIAFLSGDQQHESTKERLLGFKQALNTNAIDVNEEWILDGKYAFESGV
DGANKLFSMENKPSAIVACNDEIAAGALFAARLAGLDIPAELSIVGFEDSPFSRQTWPKL
TTVHQPNIEIAQIATQLLIDKRKAQGNETFKVFTPSPVIRDSTSAPI
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
ttgatccgcctaataaagagtcttttttatatgaaagcaactattaatgatgtcgctaaa
tttgctggcgtatcaataaaaacagtatcacgggtaaccaacaaagaaccttcggttaaa
caaacaacaatagacaaagttaaccaagcgattgccacgttaaattatcaacccaatctt
gctgcgcgaaatttagccagcactagctcatatgtaattgggtttatttatgacaatccc
aatgcctattatattattgatatgcaaaacggtattttatctgcctgtaaagagcgtgga
ttcgagctgcttatccacccttgtaatgcaaaatctgacactatctgtgaagaactgacc
gccatggtgaaacattcacgcttagccggtttagtgttaaccccgcctatgtctgaaaat
cccaatattttagctgcacttgatagtatcaaggctaattatgtgcgtattattgcaggt
gaaaacaattcacaaagtaacggcctaacggttctggtaaacgataagcacggcgctgta
gcaataactcaacatcttattgatcttggccatagaaatattgcttttctcagtggcgat
cagcaacatgaatcaacaaaagagcgcttactaggatttaaacaggcgttaaataccaat
gccatcgatgtgaatgaagaatggattttggatgggaaatacgctttcgagtccggtgtt
gatggcgcgaataaattattttctatggaaaacaaaccctcagccatcgttgcctgtaac
gatgagattgcagctggcgcgctatttgcggcaagacttgcagggttagacataccggca
gaattgtccattgtcggctttgaggacagtccgttttctagacaaacgtggccaaaacta
actactgtgcaccagcccaatatcgaaatagcgcaaatagcgacacaattattaattgat
aaacgaaaagctcagggtaacgaaaccttcaaggtctttacccctagcccagtcatccga
gattcaacgtcggcgccaatttaa
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