KEGG   Shewanella denitrificans: Sden_2766
Entry
Sden_2766         CDS       T00344                                 
Name
(GenBank) RNAse III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
sdn  Shewanella denitrificans
Pathway
sdn03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:sdn00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Sden_2766
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdn03019]
    Sden_2766
   03009 Ribosome biogenesis [BR:sdn03009]
    Sden_2766
   03036 Chromosome and associated proteins [BR:sdn03036]
    Sden_2766
Enzymes [BR:sdn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     Sden_2766
Messenger RNA biogenesis [BR:sdn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Sden_2766
Ribosome biogenesis [BR:sdn03009]
 Eukaryotic type
  90S particles
   RNase
    Sden_2766
 Prokaryotic type
  rRNA processing factors
   Sden_2766
Chromosome and associated proteins [BR:sdn03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     Sden_2766
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM DSRM_2
Other DBs
NCBI-ProteinID: ABE56045
UniProt: Q12KI1
LinkDB
Position
complement(3307782..3308462)
AA seq 226 aa
MEPVKNLARLSRTLGYEFTNQELLVQALTHRSAANKHNERLEFLGDSILSIVISDALYHQ
FPKATEGDLSRMRATLVKGETLTLIAKEFKLGDYLFLGPGELKSGGFRRESILADAVEAI
IGAVYLDANMQACETLLLSWYKVRLDEIKPGINQKDPKTILQEYLQGYKKPLPDYQVVQV
DGEAHDQTFTVECRIQDLDEVVTGVGSSRRKAEQLAAAQILELINK
NT seq 681 nt   +upstreamnt  +downstreamnt
atggaacctgtaaaaaatttagcgcgtttaagccgcaccttaggctatgaatttacgaat
caagagttattagtacaagcattaacccatcgcagtgctgccaataagcataacgaaagg
ttggagtttttgggcgattctattctttccatcgtgatttcagatgccctatatcatcag
tttcctaaggcgacggaaggtgatctgagccggatgcgcgccaccttagtgaaaggtgaa
accttaaccttaatcgccaaagagtttaagctaggggattacttgttcttagggccagga
gagcttaaaagcggcggttttagacgtgagtccatccttgccgatgcggttgaagccatt
atcggcgcggtttatttagatgccaatatgcaagcttgcgaaacattactgctaagctgg
tataaggtgcgtttagacgaaatcaagcctgggataaatcaaaaagatcctaagactatt
ttgcaagaatacctacaaggctataaaaagcctttgcctgattaccaagtggtacaggtt
gatggtgaagcgcacgatcagacattcacggtggagtgtcgcatacaagatttagatgaa
gtggtcacaggtgtgggcagttcgagaagaaaagctgagcagcttgcagcggctcagata
ttggagttaattaataaatga

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