Shewanella denitrificans: Sden_2766
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Entry
Sden_2766 CDS
T00344
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Sden_2766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdn03019
]
Sden_2766
03009 Ribosome biogenesis [BR:
sdn03009
]
Sden_2766
03036 Chromosome and associated proteins [BR:
sdn03036
]
Sden_2766
Enzymes [BR:
sdn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Sden_2766
Messenger RNA biogenesis [BR:
sdn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Sden_2766
Ribosome biogenesis [BR:
sdn03009
]
Eukaryotic type
90S particles
RNase
Sden_2766
Prokaryotic type
rRNA processing factors
Sden_2766
Chromosome and associated proteins [BR:
sdn03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Sden_2766
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
ABE56045
UniProt:
Q12KI1
LinkDB
All DBs
Position
complement(3307782..3308462)
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AA seq
226 aa
AA seq
DB search
MEPVKNLARLSRTLGYEFTNQELLVQALTHRSAANKHNERLEFLGDSILSIVISDALYHQ
FPKATEGDLSRMRATLVKGETLTLIAKEFKLGDYLFLGPGELKSGGFRRESILADAVEAI
IGAVYLDANMQACETLLLSWYKVRLDEIKPGINQKDPKTILQEYLQGYKKPLPDYQVVQV
DGEAHDQTFTVECRIQDLDEVVTGVGSSRRKAEQLAAAQILELINK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggaacctgtaaaaaatttagcgcgtttaagccgcaccttaggctatgaatttacgaat
caagagttattagtacaagcattaacccatcgcagtgctgccaataagcataacgaaagg
ttggagtttttgggcgattctattctttccatcgtgatttcagatgccctatatcatcag
tttcctaaggcgacggaaggtgatctgagccggatgcgcgccaccttagtgaaaggtgaa
accttaaccttaatcgccaaagagtttaagctaggggattacttgttcttagggccagga
gagcttaaaagcggcggttttagacgtgagtccatccttgccgatgcggttgaagccatt
atcggcgcggtttatttagatgccaatatgcaagcttgcgaaacattactgctaagctgg
tataaggtgcgtttagacgaaatcaagcctgggataaatcaaaaagatcctaagactatt
ttgcaagaatacctacaaggctataaaaagcctttgcctgattaccaagtggtacaggtt
gatggtgaagcgcacgatcagacattcacggtggagtgtcgcatacaagatttagatgaa
gtggtcacaggtgtgggcagttcgagaagaaaagctgagcagcttgcagcggctcagata
ttggagttaattaataaatga
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