Shewanella denitrificans: Sden_2776
Help
Entry
Sden_2776 CDS
T00344
Name
(GenBank) transcriptional regulator, LysR family
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdn03000
]
Sden_2776
Transcription factors [BR:
sdn03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Sden_2776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ABE56055
UniProt:
Q12KH1
LinkDB
All DBs
Position
complement(3317090..3318004)
Genome browser
AA seq
304 aa
AA seq
DB search
MTMQHINYNHLYYFWMVKKKGSVTKAAQALCLAPHTISGQIKALEARLNGSLFNRVGRGL
ESTELGELVFRYADKMFDLSYEMLDILNYQKDTSILFEVGIADVLSKALASRVLLSALPT
DGTMNLACIESTHESLMARLREHKLDVILSDCAGDSLKYPEILSKKLGECSISFYSASEL
NTAFPACLEEQGLLLPSKNTSVGQQLHRWFAEQSLTVRIAGEFDDAAMMKAFGFFNKGIF
VAPSIYRHDILSQGMVLLGEAADIKEEYHLIFAERMIQHAGVKRLLTTDFSDVFSGVATL
HQQI
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgacaatgcaacacattaattataatcatctttattatttttggatggtgaaaaaaaag
ggcagcgtgactaaagctgctcaagccctttgtcttgcacctcatactatttctgggcag
ataaaagccttggaagcacgccttaatggcagtttatttaaccgagtgggtcgagggctt
gagtctaccgagcttggcgagttagtctttcgttacgctgataagatgttcgatttaagt
tatgaaatgcttgatattttgaactatcaaaaagacacctccatcttgtttgaggtgggt
atcgccgatgtcttatctaaagcactggcgagtcgggtgttattgtcggcgctgcccact
gatggaaccatgaatttagcctgtatagagtcgactcatgagagtttaatggcacgcctt
agggagcataagctggatgttatcttgtcagattgcgccggagactcgctcaaataccct
gagattttgtcgaaaaagttgggggaatgcagcatcagcttttattcggccagtgagtta
aacactgcgtttcccgcctgtcttgaggaacaaggcctgttgctgcccagtaaaaatact
tctgtagggcagcagttgcatcgatggtttgccgagcaaagcttaacggtacgcattgct
ggggagtttgatgatgccgccatgatgaaggcctttggctttttcaacaaaggcatattt
gttgcgccatcaatttatcgtcatgatatactttcacaaggcatggtattgcttggggaa
gctgcagatattaaagaagaatatcatctaatatttgccgagcgcatgatccagcatgct
ggcgtgaaacgcttattaaccacagattttagcgatgtctttagtggagttgcaacgctt
catcaacaaatctaa
DBGET
integrated database retrieval system
