Shewanella denitrificans: Sden_2833
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Entry
Sden_2833 CDS
T00344
Name
(GenBank) DNA primase
KO
K02316
DNA primase [EC:
2.7.7.101
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sden_2833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdn03032
]
Sden_2833
Enzymes [BR:
sdn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.101 DNA primase DnaG
Sden_2833
DNA replication proteins [BR:
sdn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Sden_2833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNAG_N
Zn_ribbon_DnaG
DnaG_DnaB_bind
Toprim_2
Toprim
Toprim_4
Toprim_3
DnaB_bind
HEPN
Motif
Other DBs
NCBI-ProteinID:
ABE56112
UniProt:
Q12KB4
LinkDB
All DBs
Position
3380733..3382457
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AA seq
574 aa
AA seq
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MAIPRDFINELIARTDIVELIDRKVPLKKAGKNHSACCPFHSEKSPSFTVSRDKQFYHCF
GCGVHGNAIDFIMEYDRLEFVDAIEELAGQLGLAVPQEQGTGNRVDQGLSRDLYQLMEEA
KLFYQSQLRQHADKQKVIDYLAMRGLSEDVIEHFGIGFAPDGWDGLLSRYRQHPQSQDKL
LTAGMLIANDSGKRYDRFRDRLMFPIRDRRGRVVGFGGRVLGEGTPKYLNSPETPIFHKG
NELYGLYELKQRHRDPEQVLIVEGYMDVVALAQFGVDYAVASLGTSTTAEQFQLLVRSAK
EVICCYDGDRAGREAAWRALETALPLLKPGDKVRFMFVPQGEDPDSMVRKVGKDAFEQAM
KQALSLPEFLFDTLASNYGTDKGDLAKQAIGLIEKVQDSVLQNLLLENLAHKLGMNSADD
LKKKFGFTVKQSQTVNSKGLQGRGTPLRLAIALLVQHPDLGLSLAPQPALAHLQLAGIEL
LNHLLTVTREEKLNSAQLLELHREHPQKATLIKLAQWDHQVADDNLIQEFRQSLIWLNNQ
YIEQRYQELSLKQTLTKAEKVQLQKLISIMKGLS
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcccccgcgattttattaatgagcttattgctcgtactgacatagtcgagctt
atcgaccgtaaagtaccattaaaaaaagctgggaaaaaccattcggcttgttgtcctttt
cacagtgaaaaatctccttctttcaccgtcagtagagacaagcaattctatcactgcttc
ggttgtggcgttcatggcaatgccattgattttataatggaatatgacagattagaattt
gtcgatgccatagaagaactcgctggacaactggggttagccgttccgcaagagcaagga
acgggcaatagagtcgatcaaggcttaagccgagatctgtatcaactaatggaagaagcg
aaactcttctaccaaagccaattacgccaacatgctgacaagcaaaaagtcatcgattac
ttagccatgcgtggcttgagtgaagatgtcatcgagcattttggcatagggtttgccccc
gatggctgggatggattactgagccgttatcgccagcatcctcaatcccaagataagctg
ctgaccgccggcatgctaatcgccaatgatagcggcaaacgctacgacagatttcgtgac
cgattaatgtttcctatcagggacagacgcggacgtgtagtcggctttggtggacgagtt
ttaggagaaggtacgccaaagtacttgaattctccagaaacgcccatatttcataagggt
aatgagctttacggcttgtatgagttaaagcagcgtcaccgcgatccagaacaagtactc
attgttgaaggttatatggacgtggtggcattggcccaatttggggtggattatgctgtc
gcctcactgggtacctcgactacagccgaacaatttcagttattggttcgtagcgccaaa
gaagtcatttgttgctatgacggtgacagagcaggccgcgaagccgcatggcgagcacta
gaaaccgcattgccgctactaaaacctggcgataaggtacgctttatgttcgtgcctcaa
ggtgaagaccctgattccatggtgcgcaaagtcggcaaagacgccttcgaacaagccatg
aagcaagcgctaagtttacctgagttcttgtttgacaccttggccagtaactatggcact
gataaaggtgacttagcaaaacaagccatcggcttaattgaaaaagtgcaagacagcgtg
ctgcaaaacttattgctggaaaatctagcccacaagctaggcatgaacagtgcagacgat
ctgaaaaagaaatttggcttcacagtcaagcagtcacagacagtaaatagtaaaggctta
caaggccgtggtacgccactgcgcttagctatagccttactggtgcaacatccagattta
ggactttccttggcaccgcagccagcgttagcccatttacaacttgcaggtatagaatta
ctcaaccacctgctaacagtcactcgagaagaaaagttaaacagcgcacaactacttgaa
ttgcacagagaacacccgcaaaaggcgactctgataaaattggcccaatgggaccatcaa
gtggcggatgataacttaattcaagagtttaggcagagtttgatttggctgaacaatcaa
tatattgaacagcgatatcaagagcttagcctaaagcagaccttaaccaaagccgagaaa
gtacaattgcaaaagctgatttccatcatgaaaggcttaagctaa
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