Shewanella denitrificans: Sden_2929
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Entry
Sden_2929 CDS
T00344
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sden_2929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdn03400
]
Sden_2929
Enzymes [BR:
sdn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Sden_2929
DNA repair and recombination proteins [BR:
sdn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sden_2929
Prokaryotic type
Sden_2929
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABE56207
UniProt:
Q12K19
LinkDB
All DBs
Position
complement(3495757..3496416)
Genome browser
AA seq
219 aa
AA seq
DB search
MKSWQALIEQEQNKAYFQALQAKVATERAQGRRIFPADDSVFAAFAVTPLEQVKVVILGQ
DPYHGLGQAHGLCFSVPEGIKIPPSLVNIYKELATDIEGFNPPKHGDLRSWAQQGVLLLN
TVLTVEEGKAHSHAKWGWECFTDEVLLALNQCSSPIIFVLWGAHAIKKGKVITASQHTIL
QGPHPSPLSAYRGFFGCKHFSTINGILLKQGDKAIDWQV
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcttggcaagcattaatagaacaagagcaaaataaggcgtattttcaagccttg
caagccaaggtggccactgagcgagcccaggggagacgaatatttccagccgatgactcg
gtatttgcagcttttgcagtgacgccactggaacaggtgaaagtggtgattttggggcaa
gatccctatcacggcctaggacaagcccacggcttatgtttttcagttcccgaagggatt
aaaatcccgccctcattggtgaatatttacaaagaacttgccacggatattgaaggcttt
aacccacccaagcatggtgatttacgctcttgggcgcagcaaggagtattgttgttaaat
acagtgctaaccgtagaggaaggtaaagctcattcccatgctaaatggggctgggagtgt
ttcaccgatgaagtgttattagccttaaaccaatgttcgtcacccatcatattcgtactt
tggggggcgcacgcgattaaaaagggtaaggtgatcaccgcctctcaacacactattttg
caagggcctcatccttcaccgctttctgcatatcgcggtttttttggttgcaagcatttc
tcaaccatcaatgggattttgcttaaacaaggcgataaagcgatagattggcaagtgtaa
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