Shewanella denitrificans: Sden_2936
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Entry
Sden_2936 CDS
T00344
Name
(GenBank) ABC transporter, ATP-binding/permease protein
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdn02000
]
Sden_2936
Transporters [BR:
sdn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Sden_2936
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
RsgA_GTPase
ABC_ATPase
AAA_22
AAA_29
AAA
AAA_16
MMR_HSR1
nSTAND3
AAA_25
AAA_5
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ABE56214
UniProt:
Q12K12
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All DBs
Position
complement(3506867..3508648)
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AA seq
593 aa
AA seq
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MNTSKSVAVIPWLAGFLRPYRWRVVAAIVFLFIGSLAWLSLGQGVRLMVDEGFMADNAGR
LNEIMVFILLITFVSGAAVFFRFYLMTWLGERVSADIRLTVYRHLLSLSPNFFASQRTGE
VISRFTADTTLLQSVVGASLSMALRSCVTVIGGIVMMGFTSVKLTLLVLLAVPLVLAPVA
ILGKKVRELSRKSQDKVGDLGAYIDETLHEIHTVQAYTHEDKDRQLFSERVEAVMLVAKA
RIGYRSLLISSVMFLSIGAIACVTWIGAKDVVSGAITGGELSAFMFYAVMVAGAVATISE
VFSEIQRASGAAERLIELANTPVDLPELETPKHLPSKTELKLSGALSLENVHFSYPSSPE
QQAISGLNLVLKPGERVALVGPSGAGKSTLFELLLRFYSLDSGCITLDGVDIADLSLHEL
RSQYALVPQESVIFAHNVLENVRYGRPDATEEEVIAACEAAKAHEFITEFKDGYQTYLGE
RGVRLSGGQKQRIAIARAILADRPLLLLDEATSALDAISEDKVKQALDTLMQGRTSLVIA
HRLATVINVDRIIVLDKGCVVATGNHQTLMQTSELYREFASLQLLTEPKQMTA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
ttgaacacctcaaagtctgttgcagttatcccatggttagcgggatttttacgcccttat
cgttggcgcgtcgtggccgccatagtgtttttattcataggctcattggcctggttatct
ttaggccaaggcgtgcggctgatggtggatgaaggctttatggccgataatgctggccgt
ttaaatgaaatcatggtgtttattttactgatcacgtttgtcagtggtgcagcggtgttt
ttccgtttttatttaatgacttggcttggagagcgggtcagcgccgatattcgcttaacc
gtttatcggcatttattgtcattatcgcctaacttttttgcatcacagcgaaccggggag
gttatctcgcgctttaccgccgatactactttactccaaagcgtggtgggggccagtcta
tccatggcgctgcgctcttgcgtcacggtaattggcggcatagtgatgatgggctttacc
agtgtaaaactcaccttgctggtgttgctggcagtgccattagtattagcgcctgtggcc
atattaggtaaaaaagtacgtgagttatcccgtaaaagccaagataaagtgggggatctg
ggggcttatatcgatgaaaccttacatgaaattcacacagtgcaggcctacacccacgaa
gataaagacaggcaattattttctgagcgagtcgaagctgtgatgctggtggccaaagcc
agaattggctatcggtcgttattgatatcctctgtgatgtttttgagcataggcgccata
gcctgcgtgacttggattggtgcaaaagatgtggtcagcggcgctatcacgggcggcgag
ctgtcggcctttatgttctatgcggttatggttgccggcgccgtggccaccatcagtgaa
gtcttcagtgaaattcagcgggcatccggcgccgccgagcgtttaattgagcttgccaat
accccagtggatttaccagaacttgaaacccctaaacacctaccgagtaaaaccgagctt
aaattaagtggtgcactcagccttgaaaatgtgcacttttcctacccatcaagcccagaa
caacaagcgatctctgggcttaatctagtgttaaaacctggagaacgggtggcgctagtg
ggcccaagtggcgccggcaagagcaccttgtttgaattgttactgcgcttttatagtcta
gattctggctgtattacactcgatggcgtcgatatcgcggatcttagcctgcatgagctt
cgcagccaatatgcactcgtccctcaagagtcggtgatttttgcccataatgtgttggaa
aacgtgcgttacggtaggccagatgccacagaagaagaggtgattgccgcctgtgaagcg
gccaaggctcatgagtttattacagaatttaaagacggttatcaaacctatttaggggag
cgtggcgtgcgtttatccggtggtcaaaaacagcgtatcgccattgccagagccatactc
gccgacagacctttgctattactggatgaagccaccagtgctctggatgccatcagtgaa
gataaagttaagcaagctctagataccttaatgcaaggccgcaccagtttagttatcgcc
catcgccttgcaactgtgattaatgtggatcgcattatcgtgttagataaaggctgtgtg
gtcgccacaggtaaccatcaaaccttgatgcagaccagtgagctataccgagagtttgcc
agtttgcaactgcttactgagcctaagcagatgacggcgtaa
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