KEGG   Shewanella denitrificans: Sden_3030
Entry
Sden_3030         CDS       T00344                                 
Name
(GenBank) spermidine/putrescine ABC transporter ATP-binding subunit
  KO
K11076  putrescine transport system ATP-binding protein [EC:7.6.2.16]
Organism
sdn  Shewanella denitrificans
Pathway
sdn02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:sdn00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Sden_3030
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sdn02000]
    Sden_3030
Enzymes [BR:sdn01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.16  ABC-type putrescine transporter
     Sden_3030
Transporters [BR:sdn02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putrescine transporter
    Sden_3030
SSDB
Motif
Pfam: ABC_tran TOBE_2 AAA_21 AAA_29 SMC_N RsgA_GTPase AAA_28 Peptidase_S3 nSTAND1 ATP-synt_ab AAA_22 ORC-CDC6-like NACHT AAA_16 AAA_23 nSTAND3 DUF87
Other DBs
NCBI-ProteinID: ABE56308
UniProt: Q12JR8
LinkDB
Position
complement(3638981..3640153)
AA seq 390 aa
MSSTSGTAQHTAPQPLTTQPLAPQQAAEPQVLLKIDGVSKLFDGVRAVDKVSLTINKGEI
FALLGGSGSGKSTLLRMLAGFERPSEGRIYLDGVDITDMPPYERPINMMFQSYALFPHMT
VEQNIAFGLKQDKLPKDEITQRVAEMLKLVHMEKYAKRKPQQLSGGQRQRVALARSLAKR
PKLLLLDEPMGALDKKLRTEMQLEVVEILERVGVTCVMVTHDQEEAMTMAGRISIMSEGW
IAQTGSPMDIYESPNSRMIAEFIGTVNLFEGDIVEDEAAHVIIASKTLSQQFYVDYGVST
SVEDKHVWLALRPEKTIICREQPEGEYNWAKGVVHDIAYLGGISVYYIKLEDGQIVQSSM
ANRERRSDRPTWEDQVFISWEASSGMVLRS
NT seq 1173 nt   +upstreamnt  +downstreamnt
atgtcaagcacctcgggcactgcccaacacacggcgccgcagccactaacaacacagcca
ctagcaccacagcaagccgccgaaccacaagtgctgctaaagatagatggcgtgagtaag
ttgtttgatggcgtgcgtgccgtagacaaagtgtcactgactatcaataaaggcgaaata
tttgcgttgcttggtggctcaggttctggcaagtcgaccctacttcgcatgcttgcaggc
tttgagcgccccagtgaaggccgaatttacttggatggcgtagacattaccgacatgccg
ccttatgagcggccaatcaatatgatgttccagtcctatgcgttatttccgcacatgacg
gttgagcaaaatattgccttcggcttgaagcaagataaattacctaaggatgaaatcact
cagcgagtggcagagatgctcaagctggtgcacatggaaaaatacgctaagcgtaagccg
cagcaattgtcaggtggccagcgtcagcgggtggccttggcgcgctcccttgccaaacgg
cctaagctgttgttattggatgagcccatgggggccttggataaaaaactgcgtactgaa
atgcagctcgaagtggtcgaaattctcgagcgtgtcggcgtgacttgcgtcatggtgacc
catgatcaagaagaagccatgaccatggcagggcgtatctccatcatgagtgaaggctgg
atagcccaaactggctcacccatggacatttacgagagccccaatagccgcatgatcgcc
gaatttatcggtacggttaacttgtttgaaggtgatatcgtcgaagatgaagcggcccat
gtgatcatcgcctctaagaccttgtcgcagcagttttatgtggactatggcgtctcgacc
agcgtggaagacaagcacgtttggctggcgctgcgtccagagaaaaccattatttgccgt
gagcagccagagggtgaatacaactgggccaagggtgtggtgcatgacatcgcctatctt
gggggcatttctgtgtactacatcaagcttgaagatggtcaaatcgtgcagtcgagcatg
gccaaccgtgaacgtcgaagcgatcgcccgacttgggaagaccaagtcttcatcagctgg
gaggccagcagcggcatggtattaagatcatga

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