Shewanella denitrificans: Sden_3127
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Entry
Sden_3127 CDS
T00344
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sden_3127
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdn01007
]
Sden_3127
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdn03016
]
Sden_3127
Enzymes [BR:
sdn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Sden_3127
Amino acid related enzymes [BR:
sdn01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Sden_3127
Transfer RNA biogenesis [BR:
sdn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Sden_3127
Prokaryotic type
Other AARSs
Sden_3127
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
AsnA
Motif
Other DBs
NCBI-ProteinID:
ABE56404
UniProt:
Q12JH2
LinkDB
All DBs
Position
complement(3756582..3758084)
Genome browser
AA seq
500 aa
AA seq
DB search
MTELVQDENKLIAERRAKLDHIRTQCPANAHPNTWERSHKAAELQAQYGENTKEELEALG
YQTSIAGRVMAKRGPFLVIQDVSGRIQAYAGKPVQGDLKERYQGLDIGDIIGVKGQLHLS
GKGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRNAFIMRSKVV
SAIRNFMIKKEFMEVETPMMHVIPGGASARPFVTHHNALDMAMYLRIAPELYLKRLVVGG
FERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYQDLMDLTEEMLSSIAIDLLGSAQM
PYGEHTVDFGGPYARLSMLEAIQKYNPENATIQAMTYEQVKDVEFMRDLASSLGIKLEKF
WTCGQLLEEIFGETAEPKLMQPTFITGYPADISPLARRNDNNDFITDRFEFFIGGREVAN
GFSELNDAQDQDNRFKAQVNAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVML
FTNTHTIRDVILFPAMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgactgaactagtacaagacgagaacaaactgattgccgagcgccgtgccaagttagat
cacatacgcacacaatgcccagctaacgcccaccctaatacgtgggagcgtagccataaa
gcggctgagctacaggcgcagtacggtgaaaacactaaggaagaattagaagctttaggt
tatcaaaccagcatagctggccgtgtgatggcaaaacgtggtcctttcttggtgattcaa
gatgtgtctggccgtattcaagcttatgcgggcaaaccagtgcagggcgatctgaaagag
cgttatcaaggtcttgatatcggtgacattattggtgttaaaggtcagctgcatttgtct
ggtaaaggcgatttgtatgtcaatatggaagaataccagctgttgactaaagcgctgcgc
ccattgcctgaaaaattccacggtttaacggatcaagaaacccgttaccgccagcgttat
gttgacttgatcgttaacgaagagtcacgcaacgcctttattatgcgctctaaagtggtt
tcagctattcgtaacttcatgatcaaaaaagagttcatggaagttgaaaccccaatgatg
cacgttattccaggcggtgcttctgcgcgtcctttcgtgacacaccacaatgcattagac
atggccatgtacttgcgtatcgcgccagagctttatcttaagcgtttagttgtgggcggt
tttgagcgggtgtttgaaatcaaccgaaacttccgtaacgaaggcctatcgccacgccat
aacccagaattcactatgatggaattctatatggcttacgcggattaccaagatcttatg
gatctcaccgaagagatgctaagttcaatcgccatcgatttattaggcagtgcgcaaatg
ccttacggcgagcacacggttgattttggtggcccttatgctcgcttgagcatgttagaa
gcgattcaaaagtacaatccagagaacgcgactattcaagccatgacttacgagcaagtg
aaagacgtcgagttcatgcgtgatttagcatcgagcctaggcatcaagcttgaaaagttc
tggacctgtggtcagttattggaagaaatttttggtgaaactgctgaacctaagctgatg
cagccgaccttcattactggctacccagcggacatttcaccgcttgcacgccgtaacgat
aacaatgattttatcactgacagattcgagttcttcatcggtggccgtgaagtggctaac
ggtttcagcgagcttaatgatgcgcaagatcaagacaatcgtttcaaggcgcaagttaat
gctaaagatgccggtgatgatgaagccatgttctatgatgctgattacatcacagccctt
gagcacggtttaccgccaacggcaggtcaaggtattggtatcgatcgtttagtgatgtta
tttactaacactcacactatccgcgacgtgattttattcccagcgatgcgcccacaggcg
taa
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