Shewanella denitrificans: Sden_3152
Help
Entry
Sden_3152 CDS
T00344
Name
(GenBank) transcriptional regulator, AraC family
Organism
sdn
Shewanella denitrificans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
Sigma54_activ_2
HTH_AraC
Sigma54_activat
AAA_22
HTH_3
AAA
Motif
Other DBs
NCBI-ProteinID:
ABE56428
UniProt:
Q12JE8
LinkDB
All DBs
Position
complement(3779643..3780965)
Genome browser
AA seq
440 aa
AA seq
DB search
MNDIKLKAAINNQQLTSWIGESAFILITKQRLGAMAKSELPVLIIGERGTGKEIAARMLH
DCSVRTGAPFISISCKNSNKQQLIAQIEKGISAAQGGSLYIKNVDDLVEEATGSLKSFWL
RNDVSKPDVRLIVSSSTAPMIEVELIENEAGLIKEHFLHWLHYHCLNIELPTLSNREQDI
EALVQAYQLSDHNIGKLSFQACAWDTLKHYSWPENVKQLKRCLDKLAVQAESSIINRQIL
LNSFPLMRQTQALSELCIDPIKRQIFTKPYLKIDNQAVGFSAPVLTVNHQQDQVGSTESD
NIVHHAKNHPGLNKAITYLYKNFKAHLTMEELAKHACISPSHLSYLFKHYLGMSFKQVLL
RLRIVKAMEIFSQTPHRQVTQVCDDVGFSDLSFFVRKFKTTVGVSPGVYRDQFSQSESSP
ELLALVNDLAHPLLQLYIQH
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatataaaactgaaagcggccataaataatcagcagctaacatcatggataggg
gagagtgcatttatactgataacgaaacagagattaggtgccatggcgaaaagcgagctt
cctgtactcatcataggagagagaggtacggggaaggaaattgctgcacgcatgttacat
gattgcagtgttagaactggggcaccctttatcagcatcagctgtaaaaatagcaacaag
caacagctaatagctcagatagaaaagggcatatccgcagcccaaggaggtagcctatac
attaaaaatgttgatgacttggttgaagaggctactggatccttaaaaagcttttggctt
cgcaatgatgtttcaaagccagatgttcgcctcatcgtcagcagttcgactgcgcctatg
atcgaggttgaacttatagaaaatgaagctggattaataaaagaacatttcctacattgg
ttgcattaccactgcctgaatattgaactacctacactctctaatcgggaacaagacatt
gaagcgctcgtacaagcgtatcaattgagtgatcacaatataggaaaactctcatttcaa
gcttgtgcttgggatacattgaagcattattcttggcctgaaaacgttaagcaattgaaa
aggtgtcttgataaattagcggtgcaggctgaatcatcgattatcaatcgacaaatatta
ctcaatagttttccattaatgaggcaaacacaagcgttaagcgagctgtgtatagaccca
ataaaacggcagatatttactaaaccttacttgaaaattgataatcaagctgtcggattt
tctgcccctgtgttgactgttaaccatcaacaagatcaggtggggtcaactgaaagcgat
aatatagtccaccatgctaagaatcatcctgggttgaataaagccattacttatttgtat
aaaaacttcaaagctcatctcaccatggaggagttggcaaagcatgcatgcattagccct
tctcatttatcttatctgtttaagcattatttagggatgtcatttaaacaggtcttacta
cggctaagaattgtaaaagcgatggaaatattctcccaaaccccccataggcaggtaaca
caagtctgtgatgatgtcggtttttcggatttgagtttttttgtgcgtaaattcaaaacc
acggttggcgttagccctggtgtttaccgagatcaatttagtcaatcagaatctagccca
gaactgttggcgttggttaatgacttagcacatccattactgcagttatatattcaacat
tag
DBGET
integrated database retrieval system
