Shewanella denitrificans: Sden_3155
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Entry
Sden_3155 CDS
T00344
Name
(GenBank) SAM-dependent methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdn03009
]
Sden_3155
Enzymes [BR:
sdn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
Sden_3155
Ribosome biogenesis [BR:
sdn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sden_3155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Methyltransf_31
Cons_hypoth95
MTS
Methyltransf_25
PrmA
Spermine_synth
Methyltransf_15
TRM5-TYW2_MTfase
PUA
Methyltransf_10
Motif
Other DBs
NCBI-ProteinID:
ABE56431
UniProt:
Q12JE5
LinkDB
All DBs
Position
complement(3783615..3784850)
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AA seq
411 aa
AA seq
DB search
MSCYYPFPIILGIRMAIRIKLKPGRERSLERRHPWVFSNGIHNVNGGKPQAGDTVDVVAH
DGRWLGRGAWSPESQIQVRIWTFDKEEAIDADFFARRIQRAQAGREDLIREQGLTGYRLI
AAESDGLPGITIDRYADVLVCQLLNTGAEKWRDTLVEQLALQFPGCAIYERSDVDSRKKE
GLAPVQGLLHGELPAMPIIIEENGIKIAVDVVKGHKTGFYLDQRDNRAIAARFVKGKSVL
NCFCYTGTFGLYAAKAGAASIENVDVSALALQTARDNMAINGLDDSHVNYHEADVFKLLR
QYRDEGKTFDVIVLDPPKFADNKSQLNGACRGYKDINMIAMQLLNPGGILLTFSCSGLME
SDLFQKVVADAALDAKREVQFVERMHQASDHPISSAFPEGYYLKGLVARVW
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagttgttattatccgttcccaattatattaggcatcagaatggctatcagaatcaaa
cttaaacctggccgagagcgttcactagagcgccgtcacccttgggtgttttctaacggc
atacataacgtcaatggcggcaaaccccaagcgggtgacactgttgatgtggtcgctcat
gatggccgctggttaggccggggtgcttggtcgcctgaatcacaaattcaagtacgtatt
tggaccttcgataaagaagaggccatagacgccgatttctttgctcgccgtattcaaaga
gctcaggcaggacgcgaagatcttattcgtgaacaggggttaactggttaccgtttgatt
gctgcagaatctgatgggctgccagggatcactatcgatcgctatgccgatgtgctggta
tgccagctgcttaatacgggcgcggaaaagtggcgcgatactctcgttgagcaattggcg
ttgcaattcccaggttgcgccatctatgagcgctccgatgtggattcaagaaagaaggaa
ggtttagcgcccgtgcaaggattgctgcacggtgagctgccagctatgccaattatcata
gaagagaacggcattaaaatagcggttgatgtggttaaaggccataaaacaggattctat
ttagatcaacgtgataaccgcgctatcgcggcgcgttttgtgaaaggtaaatccgtgctt
aattgcttctgttacaccggcacctttggtttgtatgctgccaaagcgggtgctgccagt
attgagaatgtcgatgtatcggcattagcactgcaaacggcgcgtgacaatatggccatc
aatggtctcgatgatagccatgtcaattatcatgaagccgatgtgttcaaattattgcgc
caataccgtgatgaaggtaaaaccttcgatgtgattgtgcttgacccgcctaaatttgcc
gataataagtcgcagctcaatggcgcttgtcgtggctacaaagacatcaatatgattgcc
atgcagttacttaatcctggcggtatattgttgaccttttcttgctctggcttgatggag
tctgacctattccaaaaagtggttgccgatgccgcccttgatgctaaacgtgaagtgcag
tttgttgagcgcatgcatcaagcgagcgatcatcctatcagtagtgccttccctgagggc
tattaccttaagggactggttgccagagtctggtag
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