Shewanella denitrificans: Sden_3180
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Entry
Sden_3180 CDS
T00344
Name
(GenBank) histidine triad (HIT) protein
KO
K02503
histidine triad (HIT) family protein [EC:3.9.1.-]
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdn03016
]
Sden_3180
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdn04147
]
Sden_3180
Transfer RNA biogenesis [BR:
sdn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
AARS associated factors
Sden_3180
Exosome [BR:
sdn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Sden_3180
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Gene cluster
GFIT
Motif
Pfam:
HIT
DcpS_C
Cupin_NOL9
Mannitol_dh_C
Motif
Other DBs
NCBI-ProteinID:
ABE56456
UniProt:
Q12JC0
LinkDB
All DBs
Position
complement(3812624..3813031)
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AA seq
135 aa
AA seq
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MTVVEQIVRREVDAVILYETDNVIAFLDHDPINLGHALICPKKPYHDFIDVPEDVMAEIL
LVARAIYRKIVKKYSSEGVSLLQNNGSFNELKHFHLHIFPRFNNDGFRWVSAEMGLQSMV
KLQAEAIGLGDDGFV
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgacggttgtagagcaaattgttagacgagaagttgatgccgtaattctttacgaaacg
gataatgtcatcgcatttttagatcatgaccctatcaacctaggtcatgcattaatttgc
cctaagaaaccctatcacgattttattgatgtcccagaggatgtcatggcggagatattg
ctggtagcaagagccatttatcgaaaaatagtgaagaaatattcatccgaaggagttagt
ttacttcagaataatggcagctttaatgagctaaaacactttcacctgcatatctttcca
agattcaacaatgacggctttaggtgggtgagtgccgaaatgggtctgcaaagtatggta
aaactgcaggcagaagccataggcctaggcgacgacggtttcgtctag
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