KEGG   Shewanella denitrificans: Sden_3218
Entry
Sden_3218         CDS       T00344                                 
Name
(GenBank) DNA topoisomerase IV subunit A
  KO
K02621  topoisomerase IV subunit A [EC:5.6.2.2]
Organism
sdn  Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:sdn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sdn03032]
    Sden_3218
   03036 Chromosome and associated proteins [BR:sdn03036]
    Sden_3218
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sdn02048]
    Sden_3218
Enzymes [BR:sdn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Sden_3218
DNA replication proteins [BR:sdn03032]
 Prokaryotic type
  DNA Topoisomerases
   Sden_3218
Chromosome and associated proteins [BR:sdn03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    Sden_3218
Prokaryotic defense system [BR:sdn02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    Sden_3218
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C
Other DBs
NCBI-ProteinID: ABE56494
UniProt: Q12J82
LinkDB
Position
complement(3851689..3854001)
AA seq 770 aa
MSDAINLSLDGVEQMPLRRFTEEAYLNYSMYVIMDRALPHIGDGLKPVQRRIIYAMSELG
LSAQSKHKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPK
SFAAMRYTEARLSKFSEVLLSELGQGTVDWGDNFDGTMKEPKTLPARLPHILLNGITGIA
VGMATDVPPHNVRELVAACVELLDEPKTELARLLEIVPGPDYPTEAEIITPSADIAKIYE
TGRGSIKARAVYTLEQGEIIITALPHQAGSGKILEQIANQMIAKKLPMVADLRDESDHEN
PVRLVIVPRSNRVDCDQLMAHLFATTDLQKSFRVNLNVLGLDGRPQVKGLKEMLSEWLVY
RVGTVTRRLEYRLEKVLARLHILDALLIAFLNIDEVIEIIRYQEDPKSELKARFNLTDKQ
AEAILDLKLRHLAKLEEFKITAEQEELAAERDKLQLILGSERRLKTLVKKELIADGETYG
DARRSPIVERSESKALTQQELTPTEAVTVVLSEKGWVRCAKGHDVDGQALSYKSGDSYLG
SAIGKSNQAAVFIDTSGRAFATDSHTLPSARSQGEPITTRFNMAPGESMQHVLMGDDDQR
YLMASDAGYGFICSFSDMASRNKAGKALLTLPENAQSLMPKRIDSSQSPSILAITNEGRM
LMFELDALPQLSKGKGNKIIGIPSERSKAREELLAHLCLVPADCSVTLWAGKRKLTLKPS
DLEHYRGERGRRGAKLPRGLQRVDSVDIEASSLSAELEDGEPNISDDSPS
NT seq 2313 nt   +upstreamnt  +downstreamnt
atgagtgatgcgataaatttaagcctggatggcgtggaacaaatgccactgcgccgtttt
accgaagaagcctacctgaattactccatgtacgtcatcatggacagggccttgccccat
ataggtgatggcctaaagccagtacagcgccgtattatatatgccatgagtgagttggga
ttatcggctcagtctaagcataaaaagtccgccagaaccgtcggtgacgtactgggtaag
tatcatcctcacggtgatagtgcttgttatgaagccatggtgttgatggcgcagccattt
tcatatcgctatcctttggtggacggccaaggtaactggggggcaccggacgatcctaaa
tccttcgccgccatgcgttataccgaagccagattatctaaattttcagaggtgttatta
agcgagctaggccaaggcacggtggattggggggataacttcgatggcaccatgaaagag
cctaagaccttaccggcgcgtttaccgcatatcttactcaacggcattaccggcatcgcc
gtgggcatggcaactgacgtgccgccacacaatgtgcgtgaattggtggccgcctgtgtt
gaattgctcgatgagcctaagacagagcttgctcgcctattagaaatcgtccctgggcct
gactaccccacagaggcggaaatcattacccctagtgctgatattgctaagatttatgag
acaggtcgcggttcaattaaagcccgcgccgtctataccctagagcaaggcgaaatcatc
atcaccgcactgccacatcaggcgggtagcggtaaaattctcgagcaaatcgccaatcag
atgatcgccaagaagctgcctatggtagcggatttacgtgatgaatcagatcatgaaaac
ccagtgcgcttagtgatagtgccgcgctcgaatcgggtcgattgcgatcaactgatggca
cacctttttgctaccacagatttacagaaaagctttagagtcaaccttaacgtgctaggc
ctagatggccgcccgcaggttaaaggccttaaagaaatgctcagcgaatggttggtttac
cgtgtgggtactgtcacccgcaggcttgaataccgcttagagaaagtactggctcgactg
cacattcttgatgccttattgattgccttcttgaacatagacgaagtaatagaaatcatt
cgttatcaagaagatcctaagagtgaattaaaagcgcgctttaatttaaccgacaagcaa
gccgaagccattttagatttaaaattgcgtcacttagccaagcttgaagaatttaaaatc
accgccgagcaagaagaattggctgcagagcgtgacaaattgcagcttattcttggttca
gagcgccgcttaaaaaccttagtgaagaaagaactgattgccgacggcgaaacctatggc
gatgccagacgctcacccatagtcgagcgcagtgaatccaaagcattaacccagcaagag
cttacgccaacagaagcggtcaccgtggtgttatcggaaaaaggctgggtgcgctgtgcc
aagggccatgatgttgacggccaagcgctttcctataagagtggtgacagttatctcgga
agtgccataggtaagagtaatcaagcggcggtgtttatcgatactagcggccgcgccttt
gccaccgacagtcataccttaccctcggcccgcagccaaggtgaacccatcaccacccgc
tttaatatggccccaggtgagagcatgcaacacgttctcatgggcgatgatgatcagcgc
tacttaatggcatcagatgcaggctacggctttatttgtagcttctccgatatggccagt
cgcaataaagccggtaaggcgctactgacgttgccagaaaatgcccagtccctgatgccc
aagcgtatcgatagcagtcaatcaccgagtatcttagccatcaccaacgaagggcggatg
ttgatgtttgagctcgatgcattgccgcagctgtctaaaggcaagggtaataaaatcatc
ggcattccatcggagcgctcgaaagcccgcgaagagttattagcacacttgtgtttagtc
ccggcagattgcagtgtgaccttgtgggcgggtaagcgcaagctcaccttgaaacccagt
gatttagagcattatcgcggcgaacgtggccgaagaggcgctaaactgccaagaggatta
cagcgggtcgatagcgtcgatattgaagcatcatcgctatcagccgaactcgaagacggc
gagccaaacatcagcgatgacagcccaagctaa

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