Shewanella denitrificans: Sden_3286
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Entry
Sden_3286 CDS
T00344
Name
(GenBank) conserved hypothetical protein
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdn03009
]
Sden_3286
Enzymes [BR:
sdn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
Sden_3286
Ribosome biogenesis [BR:
sdn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sden_3286
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
Cons_hypoth95
Methyltransf_31
PrmA
MTS
Methyltransf_15
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
ABE56562
UniProt:
Q12J14
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All DBs
Position
3911538..3912545
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AA seq
335 aa
AA seq
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MSVHSLLVAALSQREAFLSQACLDNTDCYRVFHGTVEGISGLNIDRYGNAWLIQSFHQSL
TTDELALITQTLQQAVMLPVIYNDRAAGHSRIDNELTPELQHIATTEQIIHENGIKFSSK
LRHEGQDPLLFLDMRIGREYVRQHSNNKTVLNLFSYTCGIGTAAAMGGASNVVNVDFSSF
ALAAGKRNAELNQVDDVCEFIQSDAFPALRQLAGLKVGGRRNQKLPSYPKLSATQFDLVF
LDPPRYAKSPFGIVDLIHDYQGLFKPAMLATKSGGTIVCCNNVAKVERQAWFDSLVRCVE
KQGRSVSQCEWLDCHPDFPSFDGNHPLKMVALTLS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtacactctttgttagtcgcagcgctcagtcagcgtgaggcttttttatctcaa
gcttgccttgataatacggattgctatcgtgtttttcatggcactgtagaagggattagc
ggccttaacatagacaggtatggcaatgcttggttaattcaaagctttcatcaaagttta
acgacagatgagcttgcgcttatcactcagaccttacagcaagccgtcatgttgccggtt
atctataacgacagagccgctggccattcccgtatcgacaatgaattaaccccagagctg
caacacatagccaccactgagcaaatcatccatgaaaatggcattaaatttagctctaaa
ctccgccatgaaggccaagatcccctgctgtttctagacatgcgtattggccgtgaatat
gtgcgccaacacagtaacaacaagacggtactcaacttgttttcttacacctgcggcata
ggtacagcggcggccatgggcggcgccagtaacgtggtcaatgtagatttttcatcattt
gccttggcggcgggcaaaagaaacgccgagttaaatcaagtggatgatgtgtgtgaattc
atacaaagtgatgcctttcccgcgcttaggcagcttgcagggctaaaagtcggcggcagg
cgtaaccagaaattgcccagctacccaaaactcagtgccacccagtttgatttagtgttt
cttgacccaccaagatatgccaaaagcccctttggaatagtcgatttaatccatgattac
caaggtttatttaagcctgccatgttagccaccaaaagcggcggcaccatagtctgttgt
aacaatgtggccaaagtcgagcgccaagcgtggtttgacagtctcgttcgctgcgtcgaa
aaacaaggccgtagtgtcagtcaatgtgagtggctcgattgtcatcctgacttcccttct
tttgatggcaatcatcctttaaaaatggtcgcgctgacattaagctaa
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