Shewanella denitrificans: Sden_3313
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Entry
Sden_3313 CDS
T00344
Name
(GenBank) single-strand binding protein
KO
K03111
single-strand DNA-binding protein
Organism
sdn
Shewanella denitrificans
Pathway
sdn03030
DNA replication
sdn03430
Mismatch repair
sdn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sden_3313
03430 Mismatch repair
Sden_3313
03440 Homologous recombination
Sden_3313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdn03032
]
Sden_3313
03400 DNA repair and recombination proteins [BR:
sdn03400
]
Sden_3313
03029 Mitochondrial biogenesis [BR:
sdn03029
]
Sden_3313
DNA replication proteins [BR:
sdn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Sden_3313
DNA repair and recombination proteins [BR:
sdn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Sden_3313
TLS (translesion DNA synthesis) factors
Other SOS response factors
Sden_3313
Mitochondrial biogenesis [BR:
sdn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
Sden_3313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABE56589
UniProt:
Q12IY7
LinkDB
All DBs
Position
complement(3944411..3945106)
Genome browser
AA seq
231 aa
AA seq
DB search
MASRGVNKVIIVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQGQQQERTEWHRVVMF
GKLAEITGEYLRKGSQVYLEGKLQTRKWKDQSGQDKYTTEIVVDQSGSMQMLGSRNQNQG
PSQAGSQGSQEGGYSAPAQNQYAAPAPAPQAQRPVATPNQQYNAPQQAAGAYKQPQQAPQ
QPSYAPKPQQAPQQGGGYQQAAPAQRPAPQAQPQQNFTPDLDDGWDDDIPF
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgcggtgttaataaagtcattattgtaggcaatttaggccaagatccagaa
gtacgctacatgcctaatggcaatgctgttgccaatattacagtggcgaccagcgagtca
tggaaagatcaacaaggccagcaacaagagcgtaccgaatggcaccgtgtggtcatgttc
ggtaagttggctgaaatcactggtgaatacctacgtaaaggttcgcaagtgtatttagaa
ggcaaattgcagacacgtaagtggaaagatcaaagcggtcaagacaagtacaccaccgaa
atcgttgtcgatcaaagcggtagcatgcagatgctaggtagccgtaaccaaaatcaggga
ccaagccaagcgggctcacaaggttcacaagagggtggctatagcgccccagcacagaac
cagtatgccgctccagctcctgcaccacaggctcagcgcccagttgcaacaccaaatcaa
caatacaatgcgccgcagcaggctgcgggtgcttataaacagccacagcaagcaccgcag
cagcctagctatgcgcctaagcctcagcaggcaccacagcaaggcggtggttatcagcaa
gccgctcctgctcagcgcccagcgccgcaagcacagccgcagcaaaacttcactccagat
ttggacgacggttgggatgacgatatcccgttctaa
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