Shewanella denitrificans: Sden_3357
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Entry
Sden_3357 CDS
T00344
Name
(GenBank) arginyl-tRNA synthetase
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sden_3357
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdn01007
]
Sden_3357
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdn03016
]
Sden_3357
03029 Mitochondrial biogenesis [BR:
sdn03029
]
Sden_3357
Enzymes [BR:
sdn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
Sden_3357
Amino acid related enzymes [BR:
sdn01007
]
Aminoacyl-tRNA synthetase
Class I (G)
Sden_3357
Transfer RNA biogenesis [BR:
sdn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Sden_3357
Prokaryotic type
Other AARSs
Sden_3357
Mitochondrial biogenesis [BR:
sdn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Sden_3357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1
DIL
Motif
Other DBs
NCBI-ProteinID:
ABE56633
UniProt:
Q12IU3
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All DBs
Position
4001131..4002876
Genome browser
AA seq
581 aa
AA seq
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MKSHIESLLEQTIESFKNQGIVPADFQARIQVDRTKDKTHGDLATNLAMMLTKVAGKNPR
ELAQLIIDNLPPSSHVAKVEIAGPGFINFFIDDNALATQLEQALNDEHFGITLPEPQTIV
VDYSSPNLAKEMHVGHLRSTIIGDSVVRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEEL
RAANGEQAQLELSDLETFYRAAKLRFDESTDFATRARQLVVALQSGDEYCNKLWQEFNDI
SLSHCHDVYERLGVSLTRADVHGESAYNADLEQVVKDLDAKGLLSESNGAKVVFQEAFRT
KEGEPLPVIIQKADGGYLYATSDLAAMRYRSKVLKADRALYFVDLRQALHFQQVFSLAKL
AKFVRKDMQLEHNGFGTMNGEDGRPFKTRSGGVVKLVDLLDEANNRALELVRSKNPDMDE
ATLTEIARVVGISSVKYADLSKNRTSDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRA
EDIDLTDAKIVLEHDKEKELATKLAQFGETLYKMTDKAQPNMLCNYLYELAGAFSSFYEA
CPVLAADTPAQQGSRLLLAKLTANTLNKGLSLLGIETLERM
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcacatattgaatctttattagaacaaactatcgaatcctttaaaaatcaaggt
attgtgccagccgattttcaagctcgcatccaggtcgatcgcactaaagataaaacccat
ggggatctagccactaatttagccatgatgctcaccaaggttgccggtaaaaatccccgg
gaactggcgcagcttatcatagacaatttgccgccttcgtcacacgtggccaaggttgaa
attgccggcccaggttttattaactttttcatcgatgacaacgccttagccacgcagtta
gagcaagccctcaacgacgaacattttggcatcaccttgcccgagccacaaaccatagtg
gtagattattcctcgccaaaccttgccaaggaaatgcacgtcggccatttacgctccacc
attatcggtgacagtgtggtgcgcgccttagaatttttaggtcacaaggtcatacgtcaa
aaccacgtgggtgactggggcacccagtttggtatgctgctggcctacatggaagagctg
cgcgccgccaatggcgaacaagcccaattagaattatccgatttggaaaccttttatcgc
gccgccaaattgcgtttcgatgagtccactgactttgccacccgtgcacgtcaactcgtg
gttgccctgcaatccggtgatgaatattgcaataaactgtggcaagaatttaacgacatt
tccctcagccattgccatgacgtttacgagcgtttaggggtgagcttaacccgcgccgat
gttcacggtgaaagtgcctacaatgccgatcttgagcaagtggttaaagatttagatgcc
aaaggcttactcagcgagagtaatggcgccaaagtggtgttccaagaagcgtttcgcacc
aaggaaggcgagccactgcctgtcattattcaaaaggccgatggcggctacttgtatgcc
acttcagatttagcggctatgcgttaccgctctaaagtactgaaagccgatcgcgccttg
tactttgtggatttacgccaagcattgcatttccaacaagtatttagcctggcaaaactg
gcaaaatttgtacgtaaagacatgcagttagagcacaatggttttggcaccatgaacggt
gaagatggtcgtccgtttaagactcgctctggtggtgtggttaagttagtcgacttactc
gatgaagccaacaatcgcgccttagagctagtgcgcagcaagaatccagacatggatgaa
gccaccttgactgaaatcgcccgcgtggtcggcataagctcagtgaaatacgctgatttg
tcgaagaaccgcaccagtgattacatcttcagtttcgagcaaatgctaagctttgaaggc
aataccgcgccttacttgctgtacgcttacactcgcgtcgcgggcattttcaagcgcgcc
gaagacatagatttaactgatgccaagatagtgttagagcacgataaggaaaaggagctg
gccaccaagctcgcccaatttggtgagacactgtacaagatgaccgacaaggcgcagccg
aatatgctgtgtaactatttgtatgagttagcaggcgccttctcaagtttctacgaagcc
tgcccagtactggcagccgataccccagcacaacaaggcagccgtttattgctggcaaaa
ctcacggccaacacccttaacaagggactttcactccttggtattgaaaccttagagcgg
atgtaa
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