Shewanella denitrificans: Sden_3384
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Entry
Sden_3384 CDS
T00344
Name
(GenBank) transcriptional regulator, GntR family
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdn03000
]
Sden_3384
Transcription factors [BR:
sdn03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Sden_3384
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
MarR
TrmB
HTH_41
HTH_DeoR
HTH_11
MarR_2
Fe_dep_repress
HTH_24
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ABE56660
UniProt:
Q12IR6
LinkDB
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Position
complement(4038311..4039063)
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AA seq
250 aa
AA seq
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MAYSKITQPKISDVIMEQLERMILEGSLQPGQKLPPERELAVQFEVSRPSLREAIQKLEA
KGLLMRRQGGGTYVKEQLWQSLADPIVELMHNDSESQYDLLEFRHATEGMMAYFAALRGN
DADMQNIQNCILEVEKATEIEAQADAIVRFYRAVAEASHNVAMLHLVLSLTPVLHKNVAQ
NLELLSRREEASKMANEHRRALLAAIVRRDPDAAREASNEHLSYIEEIMLAVREEDSRLQ
RSLRRLKSGG
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggcttatagcaagattacccagccaaagatttctgatgtgatcatggagcaactcgaa
cgtatgatcctcgagggcagcttacagccaggtcagaaactccccccagaacgagaactc
gccgtgcaatttgaagtgtcacggccttctttgcgtgaggctattcaaaaattagaggcc
aaaggcctgctaatgcgccgtcaaggtggaggcacttatgttaaggaacaactgtggcag
agtcttgccgatcccatcgttgagctgatgcacaacgattcggaaagtcagtatgactta
ctggagtttcgccatgccaccgaaggcatgatggcctactttgcagcgctacgtggcaac
gatgccgatatgcaaaatattcaaaattgcattctcgaagttgaaaaggccacagaaata
gaggcccaagcggatgccatagtacgattttatcgcgccgtcgccgaggcctcacacaat
gtggccatgttgcatttagtactcagtttaactcctgtgctgcataaaaatgtggcccag
aacctggaacttctcagccgacgcgaagaagcctccaaaatggcaaacgaacacagacga
gccttgcttgctgccatcgttcgccgtgatcctgacgccgcccgcgaagcctctaatgaa
catttaagttacattgaagagatcatgctggcagtgcgggaagaagatagtcgattgcag
cgtagtctgcgacgtttaaagagcggtggatag
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