Shewanella denitrificans: Sden_3448
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Entry
Sden_3448 CDS
T00344
Name
(GenBank) tRNA-processing RNAse BN
KO
K07058
membrane protein
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
Sden_3448
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Virul_fac_BrkB
Motif
Other DBs
NCBI-ProteinID:
ABE56723
UniProt:
Q12IK3
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Position
complement(4127109..4128050)
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AA seq
313 aa
AA seq
DB search
MDIQQQTRGFRYFYISVWRFILHLKARLIDDQINIRAGHLAYVTLLSLVPMIAVTMSMLS
AFPVFKGIRVNIESLVYSYFLPAAGDSAQVYINEFVNNASKGTFVGIIALLVVAILLISA
IDKALNNIWRTTEKRSLVVSFSMYWMVLTLGPVLMGSSLVATSYVVSLELFSQSELSGLL
PWLVERLPMLFSVASILLLYMVVPTQKVRFFHALLGAVVAALLFEAGKRAFAYYVTQFPS
YEAIYGALATIPILFVWVYLSWMIVLVGAEITAALPEYLDDPFEKDGTKATTALTENKEV
DESEPNQGNDTIA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtggatatacaacaacagacacgtggatttcgctatttctatatatccgtttggcgattt
atcttacatctaaaagcccgtttgattgatgatcaaatcaatattcgtgccggacatttg
gcttatgtgaccttgctttccttagtgcctatgatagccgtgaccatgtccatgctatcg
gccttccccgtttttaaaggcatacgtgtcaatatagagtccctcgtttattcatatttt
ttacccgcagcaggggattcggctcaggtctatatcaatgagtttgttaataatgcttct
aaaggaaccttcgtcggcatcattgccttattagttgtggctattctattgatatcggcg
atagacaaggcattgaacaatatctggcgaacaacggaaaaacgctccttagtggtgtcc
ttttcgatgtattggatggtactgactttagggccagtattaatggggtcaagtttagtg
gccacctcttatgtggtctccctcgagctctttagtcaaagtgaattatctggtctgtta
ccttggctggtagaacgattacctatgctgttctctgtggcatctatcttattactgtat
atggtagtgccgactcaaaaagtgaggtttttccacgccttgctcggtgcagtggtggcg
gcgctactatttgaggcgggtaagcgtgcctttgcctattacgtgactcaattcccaagt
tatgaagccatctatggtgcattggccacaattccaatcttgttcgtttgggtgtattta
tcttggatgatagtgctggtgggtgccgaaataactgcggctctgcctgagtacttagac
gaccctttcgaaaaggacggcactaaggcaaccacagccttgactgaaaataaggaagta
gatgaaagtgagcctaatcagggtaacgatacgatagcgtga
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