KEGG   Shewanella denitrificans: Sden_3458
Entry
Sden_3458         CDS       T00344                                 
Name
(GenBank) nitrogen metabolism transcriptional regulator, NtrC, Fis family
  KO
K07712  two-component system, NtrC family, nitrogen regulation response regulator GlnG
Organism
sdn  Shewanella denitrificans
Pathway
sdn02020  Two-component system
Brite
KEGG Orthology (KO) [BR:sdn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Sden_3458
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:sdn02022]
    Sden_3458
Two-component system [BR:sdn02022]
 NtrC family
  GlnL-GlnG (nitrogen regulation)
   Sden_3458
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_2 Mg_chelatase AAA AAA_16 RBB1NT
Other DBs
NCBI-ProteinID: ABE56733
UniProt: Q12IJ3
LinkDB
Position
4138983..4140383
AA seq 466 aa
MSEQVWILDDDSSIRWVLEKALHSAKLSTASFAAAESLWQALDVAQPQVIISDIRMPGTD
GLTLLDRLQLHYPHIPVIIMTAHSDLDSAVSAYKAGAFEYLPKPFDIDEAIALAERALAH
RKEQASAPIVESQVKTPEIIGEAPAMQEVFRAIGRLSRSSISVLINGQSGTGKELVAGAL
HKHSPRKDKPFIALNMAAIPKDLIESELFGHEKGAFTGASSVRQGRFEQANGGTLFLDEI
GDMPQEVQTRLLRVLADGQFYRVGGHNVVKVDVRIIAATHQNLEQAVEQGQFREDLFHRL
NVIRIHLPPLSQRREDIAQLTKHFLTSAAKEMGVEAKVLAKETAIKLAQLPWPGNVRQLE
NTCRWLTVMASGQEVLPQDLPPELIKPTANVSQVHETADWQSALILWLETQLAAGQTNLL
TDIQPEFERILLTTALKHTSGHKQDAAKHLGWGRNTLTRKLKDLSL
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgagtgaacaagtttggatcctcgacgatgacagctcaatacgttgggtattagaaaaa
gccttacacagtgccaagcttagcaccgcaagttttgcggcggcagagtccctatggcaa
gccctagacgtcgctcagccacaggttattatctctgacattcgcatgccaggcacagat
ggcttgacgcttttagatcgcttgcagctgcattatccgcatattccggtgatcatcatg
acggcccactcggatctcgacagcgccgtcagcgcctataaagccggtgcatttgaatac
ctgcctaaacccttcgatatcgatgaagccattgcgcttgcggaacgtgccctcgcccat
cgcaaagaacaagccagcgcccccattgttgaaagccaagtcaagacaccggaaatcatc
ggtgaagcgccggcgatgcaggaagtgtttcgcgccatcggccggctatctcgctcctcc
attagcgtgttgattaatggccagtcgggcacaggtaaagaattggtggcgggtgcactg
cataaacacagcccccgcaaagacaagccgtttatcgcgcttaatatggcggctatccct
aaggatttgattgagtctgaattgtttggccacgaaaagggcgcctttactggcgcttca
tctgtgcgccaaggtcgcttcgaacaagccaatggcggcaccttgtttttagatgaaatt
ggcgacatgcctcaagaagtgcaaacccgcttactcagagtcttggccgatggtcagttt
tatcgggtgggagggcacaatgtggtgaaagtggatgttcgcatcatagccgccactcac
caaaatttagagcaagcggtcgagcaagggcaatttcgcgaagatttatttcatcgcctc
aatgttatccgcattcatctgccgcccttgtcccagcgccgcgaagatatcgcccaattg
actaagcattttcttaccagcgccgccaaggagatgggggtcgaagccaaagtgctcgcc
aaggaaaccgctatcaagttggcgcaattaccttggccgggtaacgtcagacaattagaa
aatacctgccgctggctcactgtgatggcatccggtcaggaagtattgccgcaagattta
ccaccagaactaataaagcccaccgccaatgttagccaagtgcacgagactgccgactgg
cagagcgcgctcatcttgtggcttgaaacccaattggccgcgggacaaaccaacttgttg
accgacattcaacccgagtttgagcgtattctgctcaccacggcgctgaaacatacctca
ggtcataaacaggatgccgccaagcatttaggctggggtcgtaataccttgacgcgtaag
cttaaagacctatcactgtga

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