Shewanella denitrificans: Sden_3626
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Entry
Sden_3626 CDS
T00344
Name
(GenBank) oxygen-independent coproporphyrinogen III oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00860
Porphyrin metabolism
sdn01100
Metabolic pathways
sdn01110
Biosynthesis of secondary metabolites
sdn01240
Biosynthesis of cofactors
Module
sdn_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Sden_3626
Enzymes [BR:
sdn01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
Sden_3626
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GFIT
Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
ABE56901
UniProt:
Q12I25
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All DBs
Position
4346726..4348066
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AA seq
446 aa
AA seq
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MIEKYNYSGPRYTSYPTALEFDDSFTEDNLLEAIKTSKSKTLSLYIHIPFCAKLCYYCGC
NKVITRHAHKADQYLEYLASEIIKRAPLFKHYQVTQMHWGGGTPTFLTPAQILSLTALLK
QHFNFASQGEFSIEIDPREIELSMLDTLKEAGFNRISVGVQDFNKEVQIAVNREQDEQFI
FDLIARAKDLGFVSTNVDLIYGLPLQTPASFAKTIKRIIELSPDRLSVFNYAHLPSRFAA
QRKIKDEQLPTAQQRLDILHQTIESLTAAGYQFIGMDHFAKPDDELARLQREGKLHRNFQ
GYTTQEECDLLGLGVSSISQIGDCYAQNQKELQLYYQSIDTKAHALWKGCSLTRDDEIRR
IVIKQLICHFELDIASIEAELGIDFDAYFSEDMNLLKTFIDDKLVSMQDRRITISATGRL
LIRNICMCFDIYFRQKARQQQFSRVI
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaaatacaattacagcggcccaagatatacttcttaccccacggcgttggag
tttgatgactcattcacagaagataatctgcttgaggccataaaaaccagcaaaagcaaa
actttatccttgtatatacatatccctttctgtgccaaattatgttattactgcggctgt
aacaaggtgatcactcgccatgcacacaaggcagatcagtacctagaataccttgccagc
gaaatcatcaaacgagcaccattattcaagcattatcaagtaacccagatgcattggggc
ggcggcacgccgaccttcttaactccggcgcaaatattatccttaacggcattattaaag
cagcacttcaattttgcctcccaaggcgagttctccattgagattgatccaagagaaatc
gagctcagcatgctcgataccctcaaagaagcgggttttaatcgcatttcagtgggggta
caagattttaataaagaagtgcagatagcggtcaaccgtgagcaagacgagcagttcatt
ttcgatcttatcgctcgggctaaagacttaggctttgtgtccaccaatgtggatttgatt
tacggtctgccgctgcaaacaccggcaagctttgctaagaccataaaacgcattattgag
ctgtctcccgatcgtctgtctgtgtttaattatgctcatttaccttcacgtttcgccgcc
cagcgtaagatcaaagatgaacaattacccacagctcagcagcgcttggacattttacac
cagactatcgagtcactaactgctgcgggttatcagtttattggcatggatcattttgct
aagcctgatgatgaactggcaaggttacaaagagagggtaagctacaccgcaactttcaa
ggctataccactcaagaagaatgtgacttgcttgggctcggcgtctcctccatcagccag
atcggcgattgttatgcgcaaaaccaaaaagagttacagctttactaccaatctatcgat
accaaagcgcatgcgttatggaagggctgtagcctaactcgtgatgatgaaattcgccgt
atcgtgataaagcagctgatttgtcattttgaattagatattgccagtattgaagccgag
cttggaatagattttgatgcttactttagtgaagatatgaatctattaaagacttttatc
gatgacaagctggtaagcatgcaagatagacgcatcaccattagcgccacaggaaggcta
cttattcgtaatatttgcatgtgctttgatatttacttccgccaaaaagcccgccaacag
cagttttcgcgagtgatttaa
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