Sulfitobacter donghicola: SD1155_00055
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Entry
SD1155_00055 CDS
T05893
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
sdo
Sulfitobacter donghicola
Brite
KEGG Orthology (KO) [BR:
sdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdo03021
]
SD1155_00055 (sigB)
Transcription machinery [BR:
sdo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SD1155_00055 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r4_2
Sigma70_ECF
GerE
HTH_3
HTH_16
KORA
DUF7231
IF2_N
Motif
Other DBs
NCBI-ProteinID:
QAV30049
LinkDB
All DBs
Position
complement(11633..12403)
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AA seq
256 aa
AA seq
DB search
MTKESKSVNDVSPEQINQWIKEHQEDQNSGAQDKLVRHYRKLIESLAYKYSKGQSHHEDL
VQVGMVGLIGAINRFDLSFDRKFEAFLVPTVIGEIKRYLRDKTWSVHVPRRIKEIGPRIK
KVSDELTNELERSPSISEIAARLEVTDEEVLEAMEMGQSYNALSVDHSIEADKDGSTVTL
LDIMGQQDDNYDLTEKRMILERILPILSDREKEIIQCTFIEGLSQKETGERIGLSQMHVS
RLQRTAIKKLQEAAKQ
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagagtcgaaatcagttaatgatgtatcacctgaacagattaaccaatggatt
aaagaacaccaagaagaccaaaatagcggggctcaagataagttagtaaggcattatcgt
aaactaatcgaatctttagcttataaatattctaaaggtcaatcacatcatgaagattta
gttcaagtgggaatggttggtttaataggtgctataaatagatttgatttgtcatttgat
cgaaaatttgaagcattcctagtgccaactgtaattggtgaaataaaaaggtatttaaga
gataaaacatggagtgttcatgtacctagacgtataaaagaaataggtccacgcataaag
aaggtaagcgatgaacttactaacgaattagaacgttcaccttcaataagtgaaattgct
gctcgtttggaagttacagatgaagaagtccttgaagcaatggaaatgggccaaagttat
aatgcattaagtgtagatcattcaatagaagcggataaagacggttctacggttacgtta
ctagatattatgggtcaacaagatgataactatgatcttacagaaaagcgcatgatacta
gaaagaattttacctattttatctgatagagaaaaagaaatcattcagtgcacattcatc
gaaggattaagtcagaaagaaactggtgaacgaataggtctaagtcaaatgcatgtgtct
agattacagcgaactgctattaaaaagttgcaagaagcagctaaacaataa
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