Sulfitobacter donghicola: SD1155_06250
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Entry
SD1155_06250 CDS
T05893
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sdo
Sulfitobacter donghicola
Brite
KEGG Orthology (KO) [BR:
sdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdo03400
]
SD1155_06250
Enzymes [BR:
sdo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SD1155_06250
DNA repair and recombination proteins [BR:
sdo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SD1155_06250
Prokaryotic type
SD1155_06250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
PPR_3
HSF_DNA-bind
Motif
Other DBs
NCBI-ProteinID:
QAV31196
LinkDB
All DBs
Position
1289003..1290376
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AA seq
457 aa
AA seq
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MKVGVILNRVFRIHHNPLLAYISNHLDSTDTCVLIIPKEKFGDEAKLKASFYHGTLNAFI
NTLNHYQIQPNVIDYDHLIAFCKNQQLDKVVMASDIMSYHHESYDFPHQKQRFQDAGIKV
EALRVQHYFKPRKTFNNQGEPYKVFTSFYKKWRPYVMQRHRTHYELSDISKLVEPAQNSI
TIYESQNGLTEKEVQQQWHSFLNNDIQNYHSNREYLPEVLTSQLSIALAYGLIDILQVFN
DLLHGYESDESNYEAFIRELIFREFYYVLMAQYPETAHQSFKEKYRNIEWVNDKQQFDQW
KNGETGYPIVDAAMQELNQTGYMHNRMRMVTSQFLTKDLLIDWTWGETYFKDKLIDYDNA
SNVHGWQWSASTGTDAVPYFRMFNPIKQSERFDPDALYIKQWLPTLNHVDSHLLHDTKKH
MQLLKQQGIELGIDYPEPMVNHQDSRQRVMSLFKSLS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttggcgttatattaaatagagtatttagaattcatcataatccgttactagct
tatattagtaatcatttagatagtactgatacatgtgtattaattatacctaaagaaaag
tttggtgatgaggcaaaattaaaagcatcattttaccatggtacactcaacgcttttatc
aacacattaaatcattatcaaattcaacccaatgtaatagattatgatcatttaatagcg
ttttgtaaaaatcaacaattagataaagtagtaatggcaagtgacatcatgagttatcat
catgaatcatatgactttcctcatcaaaagcaaagatttcaagatgctggaatcaaagtt
gaagcgcttcgtgtacaacattattttaaacctcgtaaaacgtttaacaatcaaggggaa
ccatataaagtatttacaagtttttataaaaaatggcgaccatatgtaatgcaaagacat
agaacacattatgaattaagtgatatttcaaaattagtcgagcctgcacaaaattcaata
acaatctatgaaagtcaaaatgggttaactgaaaaagaagtacaacaacaatggcatagt
tttttgaataatgatattcaaaattatcattcaaatagagaatatctacctgaagtatta
acgagtcaactcagtattgcactagcttacggattgattgatatattacaagtatttaat
gatttattacatggttacgaaagtgacgaatctaattatgaagcatttataagagaatta
atttttagagagttctattatgtactgatggcgcaatatccagaaacagcccatcaatca
tttaaagagaaatatcgaaacattgaatgggtcaatgacaagcaacaatttgatcaatgg
aaaaatggtgaaactggatatcctattgtagatgcagctatgcaagagctaaatcaaact
ggatatatgcataatcgaatgagaatggtgacatcccaattcttaacgaaagatttattg
atagactggacatggggagaaacttatttcaaagataaattgattgattatgataatgcg
tcaaatgtgcatggatggcagtggtcggcttcgactgggacagatgctgttccatatttt
agaatgtttaaccctataaaacaaagtgagcgattcgatcccgacgcattatatataaaa
caatggctacccacacttaatcatgtagatagccatctattacacgatactaaaaagcac
atgcaattattgaaacaacaaggtattgaattaggtattgattatcctgaaccaatggtt
aaccaccaagacagtcgtcaacgtgtgatgtcattgtttaaatcgttatcataa
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