Sulfitobacter donghicola: SD1155_06380
Help
Entry
SD1155_06380 CDS
T05893
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sdo
Sulfitobacter donghicola
Pathway
sdo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SD1155_06380 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdo03019
]
SD1155_06380 (recQ)
03400 DNA repair and recombination proteins [BR:
sdo03400
]
SD1155_06380 (recQ)
Enzymes [BR:
sdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SD1155_06380 (recQ)
Messenger RNA biogenesis [BR:
sdo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SD1155_06380 (recQ)
DNA repair and recombination proteins [BR:
sdo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SD1155_06380 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
GH123_cat
IF2_N
Motif
Other DBs
NCBI-ProteinID:
QAV31220
LinkDB
All DBs
Position
1316367..1318148
Genome browser
AA seq
593 aa
AA seq
DB search
MMQETLSHYFGYDTFRPGQEEIISKIIDHRNVLGVLPTGGGKSICYQVPGLMLGGTTIVI
SPLISLMKDQVDQLKAMGINAAFINSSLTQKQQKKIEQDLISGHIQFLYVAPERFENQYF
LSQLRKVNIRLVAFDEAHCISKWGHDFRPSYQNVIQKVFTLPQDFAIVALTATATAEVQQ
DIMTKLNIEANDEVKTSTKRRNLIFKVNPTYQRQKFVVDYVTEHDEEAGIIYCSTRKQVE
ELQEVLESHKVKCTIYHAGLTNKEREAAQNDFLYDRVNVVIATNAFGMGIDKSNVRFVIH
YNMPGDLESYYQEAGRAGRDGLKSECILLFSERDRGLHEYFISVSQADDDYKEKMGEKLT
KMLQYTKTKKCLEATIVHYFEPNEKLEECKQCSNCIQENKTYDMTREAKMIISCVARMRQ
QESYSVIIQVLRGETTDYIKYNDYDQLTTHGIMKSYTTSELSHLIDELRFKGFLNENDEI
LICDKSVKKLLNDDTKVYTTPFKQKSKEKVFINTVEGVDRALFSELVKVRKQLSDKLGIA
PVSIFSDYTLEEFAKRKPESKQDMINIDGVGSYKLKHYCPQFLERIQSYKTSI
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atcatgcaagaaactttatcgcattattttggctacgatacgtttcgtccaggtcaagaa
gaaatcatttcaaaaattatagatcatcgaaatgtattaggtgtgttacccacaggtggc
ggtaaatcgatatgttatcaagtacctggattgatgttaggtggaacgacaattgttatt
agtccattaatatcattaatgaaagaccaagtagaccaattgaaagcaatggggattaat
gctgcgtttattaatagtagtttaactcagaaacaacaaaaaaagattgaacaagattta
attagcggccatattcagttcttatatgtcgcacctgaacgttttgaaaatcaatatttt
ttaagtcaattaagaaaagtaaatatacgattagttgcatttgatgaagcgcactgtatt
tcaaaatggggacatgatttcagaccaagttatcaaaatgtgattcaaaaggttttcaca
cttccacaagattttgcgattgtggcattaacagcaacggcaacagctgaagtacaacaa
gatattatgacaaaattaaatattgaggccaatgatgaagtgaagacgagcacgaagcgg
cgaaatttaatatttaaagttaatccaacatatcaacgtcaaaaatttgtcgtagactat
gtcacagaacatgatgaagaagcgggtatcatttattgttcgacacgtaaacaagttgaa
gagctacaagaggtacttgaaagtcataaggttaaatgtacgatttatcatgcgggatta
acaaataaggaaagagaagctgctcaaaatgattttctatacgatcgtgtgaatgtcgtt
attgcgacgaatgcttttggtatgggaatcgataaatctaatgtcagatttgttatacac
tacaatatgccaggggatttagaatcatattatcaagaagctggacgtgcaggtcgtgat
ggcttgaaaagtgaatgtatcttattattcagtgaacgtgatagaggacttcatgaatat
tttatatcagtatctcaagcagacgatgattataaagagaagatgggcgaaaaactaact
aaaatgctccaatatactaaaactaaaaaatgtcttgaagcaacgatagtccattatttt
gaacctaatgaaaaattagaagaatgtaaacagtgtagtaattgtatacaagagaataaa
acctatgatatgacgagagaagctaagatgatcattagttgtgtcgcacgtatgagacaa
caagaaagctatagcgtcattattcaggtgttacgtggtgaaacaacagattacattaaa
tataacgattatgaccaattgacaactcacggtattatgaaatcatatactacttcagaa
ttaagccatttaattgatgaattaagatttaaaggctttttaaatgaaaatgatgaaata
cttatatgtgataagtcagtgaaaaagttattaaatgatgacactaaagtatatacaacg
ccatttaaacaaaaatcaaaagaaaaagtgtttataaacacagtagaaggtgtagacaga
gctttatttagcgaactggttaaagtgagaaaacaattaagtgataaactgggaattgca
ccagtaagtattttctctgattatacattagaagaatttgctaagcgaaaaccagaatct
aaacaagatatgataaacattgacggtgtggggagttataaactaaaacattattgccca
caattccttgaaagaatacagtcatataagacaagtatttaa
DBGET
integrated database retrieval system
