Sulfitobacter donghicola: SD1155_07215
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Entry
SD1155_07215 CDS
T05893
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sdo
Sulfitobacter donghicola
Brite
KEGG Orthology (KO) [BR:
sdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdo03400
]
SD1155_07215 (addA)
Enzymes [BR:
sdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SD1155_07215 (addA)
DNA repair and recombination proteins [BR:
sdo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SD1155_07215 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
DEAD
ResIII
Pepsin-I3
Motif
Other DBs
NCBI-ProteinID:
QAV31368
LinkDB
All DBs
Position
1474842..1478504
Genome browser
AA seq
1220 aa
AA seq
DB search
MIPTKPKDVIWTDAQWRSIYAKGQDTLVAAAAGSGKTAVLVERIIQRILRDEIDVDRLLV
VTFTNLSAREMKHRVDQRIQQASIEDPNNEHLKNQRIKIHQAQISTLHSFCLKLIQQHYD
VLDIDPNFRTSSEAENILLLEQTIDEVLEQHYDKLNPDFIDLTEQLSNDRSDTQFRNMIK
QLYFFSIANPDPFQWLNQLSAPYHDETQQDDLLKLLNDLAMIFINAGYESLEKSYELFSM
MEGVEKQLEVIEQERRFMSDLYHNDQLQVDVLVHHQFVSRFPSISAKIKEENAMMLDALE
DAKASYDKYKDMINKVKNDYFSRTPEDLKRDMQLLAPRVSYLSEIVKDVIHDFSKHKRSR
NVLDFADYEHFALQILTNEDGTPSAIAEMYRQHFSEILVDEYQDTNRVQEKILSCIKTGD
ESNGNLFMVGDVKQSIYKFRQADPSLFIEKYNRFNVDGHEAGMRIDLSKNFRSRKEVLST
TNYLFKHMMDEAVGEITYDDAAQLYYGAPYDEVNHNVELRTLVEASSENSKLTGTEQEAN
YIVEQVKDILEHRKVYDMKTNTYRPATYKDIVILERSYGQARNLQQAFKDNDIPFHVNSR
EGYFEQTEVRLILSFLRTVDNPLQDIYLVGLMRSVIYQFTEDELANIRVFSPNDDYFYQS
IQQYIKNDMANKKLVTKLKRFLDDIQHYQDYSQRYPVYQLIDKFYNDHYVIQYFSGLIGG
RGRRANLYGLFNKAIEFENSSFRGLYQFIRFIDELIDRGKDFGEENIVGPNDNVVRMMTI
HSSKGLEFPFVIYSGLSKRFNKNDLSRQVVLNQKYGLGMDYFDVNEDIAYPSLSSVAYKA
INEKEMISEEMRLIYVALTRAKEQLILIGRVKDEKELGKLERLPISGNHLAVNERLTAPT
PFTMIYSILAKYQSSSITNDQKFETNIEQLDSNVKPRVNLYVDNFEDISTETLLSESEIR
TVEDIENDQSGNDDIKAKIKEKLTFEYPYQKDIEKPSKQSVSELKRQLETEESGTNYDRV
RQYRIGVSTYERPKFLSQQGKRKANEVGTLMHTVMQHLPFKKDRLTETELDEYIDRLIET
NIIESDAKEDIRFKEIMTFIQSDLYMNIANADQVFRELPFVVNQSKVDQIELDDEGVSII
QGMIDLIYVSEGQYYFVDYKTDAFNRRRGLTDEEIGQQLKDKYQIQMKYYRNTLETILQT
KVKGYLYFFKFGILEIDDHE
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgatacctacaaaacctaaagacgttatttggacagatgcacaatggcgtagtatttat
gcgaaaggtcaagatactttagtagcggctgctgcaggatcagggaaaacggctgtcctt
gtagaaagaataattcaacgaattttaagggatgaaattgatgttgaccgcttattagtt
gtaacatttacaaatttaagtgctagagagatgaaacatcgtgtggatcaacgtatacaa
caggcgtccatagaagatccaaataacgaacatttaaaaaatcaacgtatcaaaatacat
caagcacagatatcgactttgcatagtttttgtttaaaattaattcaacaacattatgat
gtattggatatcgatccgaattttagaacgagtagtgaagcagaaaatattctactttta
gaacaaacaatcgatgaggttttagaacaacattatgataagttaaatcctgattttatt
gatttaaccgagcaattatcaaatgatcgtagtgatactcaatttagaaatatgattaaa
cagttatatttctttagtattgctaaccctgatccattccaatggttaaatcaactatct
gcaccataccatgatgaaacacaacaagatgatttattaaaattattaaacgatttagca
atgatctttattaatgctggttatgaatcgcttgaaaaaagttatgaattattttcaatg
atggaaggtgttgagaaacaactagaagttattgaacaagaacgtcgttttatgagtgat
ttatatcataatgatcaattacaggtggatgtacttgttcatcaccaatttgtcagtcga
tttcctagtattagcgctaaaattaaagaagaaaatgcgatgatgcttgacgctttagag
gatgcaaaagcctcatatgataaatataaagacatgattaataaagtgaaaaacgattat
ttttcaagaacaccagaagatttaaaacgtgatatgcaattacttgcgccacgtgtgagc
tatctttcagaaattgtgaaagatgtcatccatgattttagtaagcataagcgaagtcgc
aatgtattagattttgctgattacgaacattttgcacttcaaattttaaccaatgaagat
ggtacaccgtctgccattgctgaaatgtatcgtcaacatttttctgaaatattagtagat
gagtatcaagacacaaaccgagtacaagagaaaattttatcttgtattaaaacgggagat
gaatcaaatggtaatttatttatggttggtgacgtaaaacaatccatttataaatttaga
caagcagatcctagcttatttatcgaaaaatataatcgatttaatgtggatggacatgag
gcaggaatgcgtattgatttatcaaagaatttccgttctcgtaaagaagtgttatctact
actaattacctatttaagcatatgatggatgaagcggtaggagaaatcacttatgatgat
gcagctcaattatattatggtgcaccatatgatgaagttaatcataatgtagaattacgt
acattagttgaagctagctctgaaaatagtaaattaacgggtactgaacaagaagccaat
tatatcgttgaacaagtaaaagatattttagaacatcgaaaagtctatgatatgaaaacc
aatacgtatcgaccagcgacgtataaagatatcgttattctagaacgaagttatggccaa
gcgcgtaatttacaacaagcttttaaagataatgatataccgttccatgtcaatagtagg
gaaggatattttgaacaaacagaagtacgtttaatattatcgtttctgcgtacagttgat
aatccattacaagacatctatttagtgggtttaatgcgttcagtaatttatcaatttaca
gaagatgaattagctaatatacgcgtatttagtccgaatgatgattatttttatcaatcg
attcaacaatatataaaaaatgatatggctaacaaaaaattagtaactaagttaaaacga
tttttagacgatattcaacattatcaagactatagtcagcgctatcctgtctatcaatta
attgataaattctataatgatcattatgtgattcaatactttagtggtcttattggtggt
agaggtcgtcgtgcaaatctttatggtttatttaataaagcgattgaatttgaaaattca
agtttccgaggtttatatcaattcattagatttattgacgagttgattgatagaggtaag
gatttcggtgaagaaaatattgtaggtccaaatgataatgtggtcagaatgatgaccatt
cacagtagtaagggcttggaattcccatttgtcatttattcagggctatctaaaagattt
aataaaaatgatctgagtagacaagttgtattgaatcaaaaatatggtttaggtatggat
tatttcgatgttaatgaagatatcgcgtatccttcattatcttcagtggcttataaggca
attaacgagaaggaaatgatctctgaggaaatgcgtttaatttatgttgcattaacgcgt
gccaaagagcaattgattctgataggtagggtgaaagatgaaaaagaattaggtaaatta
gaaagattgccaatttcgggaaatcatcttgcagttaacgaacgcttaactgcaccaacg
ccatttactatgatttatagtattttagctaaatatcaatcttcaagcattacaaatgat
caaaagttcgaaacaaacatagaacaattagatagcaacgttaaaccaagagtgaatcta
tatgtagacaacttcgaagatatatcaacagagactctgttatcagaaagtgaaataaga
actgtggaagatattgaaaatgatcaaagcggtaatgatgacatcaaagctaaaattaag
gaaaaactaacatttgaatatccatatcaaaaggatattgagaaaccatctaaacaatct
gtatctgaattgaagcgtcaattggaaacagaggaaagtggtacaaattatgatcgagtg
cgtcaataccgtattggtgtgtcaacctacgaaagacccaagtttttaagtcaacaaggt
aaacgtaaggctaatgaagtgggtacattgatgcacacagtaatgcaacatttgccgttt
aaaaaggatagattgactgaaacagagttagatgaatatatcgatcgtttaatagaaaca
aatattattgaatctgacgctaaagaagatattagatttaaagagattatgacatttatt
cagagtgatttatacatgaatattgccaatgctgatcaagttttccgagaattaccattt
gtagtgaatcaatcaaaagttgatcagatagagttggatgatgaaggtgtatcgattatt
caaggtatgattgacttgatttacgtgagtgaaggtcaatattactttgtagattataag
acagatgcattcaatcgacgaagaggcctaacagatgaggaaatcggacaacaattgaaa
gataaatatcaaattcagatgaaatattatcgcaatacattagaaacgattcttcaaaca
aaagttaaaggttatctatacttctttaaatttggcatattagaaatagatgatcatgaa
taa
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