KEGG   Sulfitobacter donghicola: SD1155_08595
Entry
SD1155_08595      CDS       T05893                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
sdo  Sulfitobacter donghicola
Pathway
sdo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sdo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SD1155_08595 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdo03019]
    SD1155_08595 (rny)
Messenger RNA biogenesis [BR:sdo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SD1155_08595 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2 Glt_symporter
Other DBs
NCBI-ProteinID: QAV31629
LinkDB
Position
1772815..1774374
AA seq 519 aa
MNLLGLLLILLGIILGVVVGYVVARNLLHQKQVQARQTADDIVNQAHKEADNTKKEKLLE
AKEENQILREQTENELRERRGELQRQETRLLQKEENLERKSDLLDKKDEILEQKESKIEE
RQQQVDAKESSVQTLIMKHEQELERISGLTQEEAVNEQLQRVEEELSQDIAILVKEKERE
AKEKVDKTAKELLATTVQRLAADHTTESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRREIARTALVNLVSDGRIHPGRIEDMVEKARKEVDDIIRD
AGEQATFEINVHNMHPDLVKILGRLNYRTSYGQNVLKHSIEVAHLSGMLAAELGEDVTLA
KRAGLLHDVGKAIDHEVEGSHVEIGVELAKKYGENETIINAIHSHHGDVEPTSIISILVA
AADALSAARPGARKETLENYIRRLERLETLSESYDGVEKAFAIQAGREIRVVVSPEEIDD
LKSYRLARDIKTQIEDELQYPGHIKVTVVRETRAVEYAK
NT seq 1560 nt   +upstreamnt  +downstreamnt
gtgaatttattaggcctcctactcattttgctgggtataattctaggcgttgttgtaggg
tatgttgttgcccgaaatttattgcatcaaaaacaagttcaggctagacaaacagccgat
gacattgttaatcaagcacacaaagaagcagacaacactaagaaagaaaaattgcttgaa
gcaaaagaagaaaaccaaattttaagagaacaaactgaaaatgaactacgtgaaagacgt
ggcgaattacaaagacaagaaacccgacttcttcaaaaagaagagaacttagagcgaaaa
tctgatctattagataaaaaagatgagattttagagcaaaaagaatcaaaaattgaagaa
agacaacaacaagtagatgcaaaagagagtagtgttcaaacattaataatgaagcatgaa
caagaattagaacgcatctccggtctcactcaagaagaagctgtaaatgagcaacttcaa
cgagttgaagaagaactgtcacaagatattgcaatacttgttaaggaaaaagaaagagaa
gctaaagaaaaagtagataaaaccgcaaaagaattgttagctactacagtacaaagatta
gcagcagatcatacaactgagtcaactgtatcagttgtaaacttgcctaatgatgaaatg
aaaggtcgaataatcggacgtgaaggaagaaatattcgaacacttgaaacacttacggga
atcgatttaattatcgatgatactccagaagctgtcattttatctggttttgatcctatc
agaagagaaatcgctagaacagctttagttaacctagtttcagatggaagaattcatccg
ggacgcattgaagatatggtcgaaaaagctagaaaagaagtagacgatatcattagagac
gctggtgaacaagcaacattcgaaataaatgttcataacatgcatcctgacttagttaaa
atacttggccgtttaaattatcgtacaagttatggacaaaatgtgcttaaacattcaatt
gaggtagcgcatctatcaggaatgttagcagcagaattaggtgaagatgttactttagcg
aaacgtgctggtttacttcatgacgtaggtaaagcaattgaccatgaagttgaaggcagt
cacgttgaaataggtgttgaattggcgaaaaaatatggtgaaaacgaaacaatcattaat
gctattcattctcatcatggtgatgttgaaccaacatctattatctcaattttagttgca
gcagctgatgcattatcagcagctcgtcctggcgctcgtaaagaaacattagaaaattat
attcgtcgtttagagcgtttagaaacactttctgaaagttatgatggtgttgaaaaagca
ttcgcaattcaagcaggaagagaaatccgtgtggtcgtatctcctgaagaaatagatgat
ttaaaatcataccgattggctagagatattaaaactcaaattgaggatgaattacaatat
ccaggtcatatcaaagtgacagttgttcgagagactagagcagtagaatatgctaaataa

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