Sulfitobacter donghicola: SD1155_10240
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Entry
SD1155_10240 CDS
T05893
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sdo
Sulfitobacter donghicola
Pathway
sdo03410
Base excision repair
sdo03430
Mismatch repair
sdo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SD1155_10240 (recJ)
03430 Mismatch repair
SD1155_10240 (recJ)
03440 Homologous recombination
SD1155_10240 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdo03400
]
SD1155_10240 (recJ)
DNA repair and recombination proteins [BR:
sdo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SD1155_10240 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SD1155_10240 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SD1155_10240 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
DSPc
Motif
Other DBs
NCBI-ProteinID:
QAV31941
LinkDB
All DBs
Position
complement(2133894..2136176)
Genome browser
AA seq
760 aa
AA seq
DB search
MIKSKYNWNLNNPTEYISDSIAQRLKLSPIIKKILESKHIIEEEDIQRILNGVDINHDCS
LLSDIDKTIERINQAIDKNERILVYGDYDADGVTSTTILVHTLQKLGAQVGWYIPNRFTE
GYGPNELAFQNAYDEGISLIITVDNGIQGHAEIKMAQDLGVDVIVTDHHEIGRTLPEAYA
IVHPMHPEFDYPFKYLCGAGVAYKLAQALLENVPNYFKAYAAIGTIADLVSLTDENRSIV
QQGLKVMNDSCPVAVKALLNQASYNDEITEETIGFIIGPRLNAVGRLEDASLAAELLMSD
SVDEAEFLAEQVGHFNQERKDIVAQITEEALAMAEDYVSQGHQFLLLAKEDWHEGVLGIV
ASKIVETYSLPTLILNIDYEQNHAKGSARSIEQVSMFEILNAHQDLISKFGGHHMAAGMT
MDIDNVEALRDGLNEWMARLSETTSLDPSKKIDVLLNEADITIKNIKDIHKLRPFGTDFN
SPLFEIQNMTINSLKAIGKEQNHLKMTLGDSNLPALFWQNGAYATQLDNGQPVNLIGNLQ
INEWNGNQTPQFIVQDIAMDTMQILDYRSKSKNTHFLNNDHTTAFVIHSKVQKSNENEFY
YGEVIPAEYDKIVFRDLPNTLDELKSTLQQTEISQIYLVFQHKMSIYFEGMPSINLFKQC
YKALINKKEMNLATEGMMLCDFLNIKANSLKFMLKVFLELGFINEDDGIITIASQPSKQD
IETSQLYQARLSRIEVEKLLLYDDFNHLKLWIKTQLGYSN
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgattaaatctaaatataattggaatttaaataacccaactgaatatatatcagatagt
atagctcaacgcttaaaactatctcctatcatcaaaaagatattagaaagtaaacatatt
attgaagaagaagacatacaacgtattttaaatggcgttgatatcaatcatgattgttct
ttacttagcgacattgataagacgatagaacgtataaatcaagctatagataaaaacgaa
cgtatattagtatatggtgattacgatgctgatggtgtgacatcaacgacaatattagta
catactttacaaaaattaggggctcaagttggatggtatataccgaaccgttttacagaa
gggtatgggccgaatgaattggcatttcaaaatgcttatgatgaaggaatttcattaatc
attactgtagataatggtatacaagggcatgctgaaattaaaatggctcaagatttaggt
gtagatgttattgtcactgatcaccacgaaattggcagaacgttacctgaagcgtatgca
attgtacaccccatgcatccagaatttgattatccttttaaatatttatgtggtgctggt
gtagcctataaattagcgcaagcattattagaaaatgtgccaaattattttaaagcatat
gcagctataggaacgattgcagacttagtatctttaactgatgaaaatcgttcaattgta
caacaaggtttaaaagtcatgaatgacagttgtccagttgccgttaaagctttactaaat
caagctagttataacgatgaaattactgaagaaacaataggttttattataggtcctaga
ttaaatgcagttggacgattagaagatgcatctttagctgctgaattattaatgtctgat
agtgtagatgaagctgaatttttagcagaacaggttgggcatttcaaccaagagcgtaaa
gatatcgtagctcaaattacagaagaagcattagcaatggctgaggattatgtttctcaa
ggacatcaatttctattattagccaaagaagattggcatgaaggagtattgggaattgta
gcatcgaaaatcgtggagacatatagtttaccaacattaattttaaatattgattatgaa
caaaatcatgctaaaggttctgctagatcaattgaacaagtttctatgtttgaaatttta
aatgcacatcaagatttaattagtaaattcggtgggcaccatatggcagctggaatgact
atggatattgataatgttgaggcattacgagatggattaaatgaatggatggcaagacta
agtgaaacgacctcacttgatcctagtaaaaaaatagatgtgttattgaatgaagctgat
attacgattaaaaatattaaagatattcataaattacgaccattcggcacagattttaat
tcaccattattcgaaattcaaaatatgactattaattcattaaaggccataggtaaagaa
caaaatcatttgaagatgacattaggtgattctaatttaccagctttattttggcaaaat
ggtgcatatgcaacacaattagataacggtcaaccggtcaacttaataggtaacttgcaa
ataaatgaatggaatggcaatcaaacacctcagttcattgttcaagatatagctatggat
acaatgcagatattagattatcgaagtaaaagtaagaatacacatttcttaaataatgac
catacaacagcttttgtcattcattctaaagttcaaaaatcaaatgaaaacgagttctac
tatggagaagttatacctgctgaatatgataaaattgtttttagagatttaccgaataca
cttgatgaattaaaaagtacattacaacaaacagaaatatctcaaatttatcttgtgttt
caacataaaatgtctatatattttgaaggaatgccaagtatcaatttatttaaacaatgt
tataaagcattaattaataaaaaggaaatgaatttagctactgaaggtatgatgttgtgt
gactttctcaatattaaagctaattcattaaaatttatgctaaaagtatttttagaatta
ggatttattaacgaagatgatggtataataacgattgcgagtcaaccaagtaaacaagat
attgaaacaagtcaattgtatcaggctaggttgtccagaatagaggtcgaaaaactttta
ttatatgatgatttcaatcatttaaaattatggattaaaactcaattgggatatagtaat
tag
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