Sulfitobacter donghicola: SD1155_11080
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Entry
SD1155_11080 CDS
T05893
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
sdo
Sulfitobacter donghicola
Brite
KEGG Orthology (KO) [BR:
sdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdo03019
]
SD1155_11080
Messenger RNA biogenesis [BR:
sdo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SD1155_11080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
G8
Motif
Other DBs
NCBI-ProteinID:
QAV32096
LinkDB
All DBs
Position
complement(2316816..2317757)
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AA seq
313 aa
AA seq
DB search
MRNVEKLNPGDSVNHFFLIHRATQGVTAQGKDYMTLYLQDKSGDIEAKLWTATKEDMQTL
KPEEIVHVKGDVINYRGRKQMKVNQIRLATPEDNMNTQDFVDGAPMSPTEIQEALSHYML
DIENANLQRITRHLIKKYQESFFTFPAASSHHHNFASGLSYHVLTMLKVAKSICDIYPLL
NRSLLYSAIILHDLGKVKELSGPVATTYTVEGNLLGHISIASDEVAEAAKELGIDGEEVM
LLRHMILAHHGKLEFGSPKMPHLKEAEILFFIDNIDAKMNMFEKAFKKTDKGQFTERIFG
LENRQFYNPIQLD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatgtagaaaaattaaatcccggtgattcagttaatcacttctttttaatccac
agagcaacacaaggtgtgacagctcaaggtaaagactacatgacactatatttacaagac
aaaagtggagatatcgaagctaaattatggactgctacgaaggaagatatgcagacatta
aagccagaagaaatcgtacatgtgaaaggtgatgtcattaactatcgcggacgtaaacaa
atgaaagtgaatcaaattcgattagcgacacctgaagataatatgaatacacaagatttt
gtagatggtgcacctatgtctccaactgaaatacaagaagcactttcacattatatgtta
gatattgagaatgctaatttacaacgtattacaagacatttaattaaaaagtatcaagaa
agcttctttacatttccagctgctagttcacatcatcataactttgctagtggtttaagc
tatcatgttttaacgatgttaaaagttgctaaatctatttgtgatatatatccactatta
aatagaagtctcttatatagtgccatcattttacatgatctaggaaaagtaaaagagtta
agtggtcctgtggctacgacgtatactgtggagggtaatttattagggcatatttctatt
gcaagcgatgaagtggctgaagctgcaaaagaacttggcattgatggtgaagaggtcatg
ttattaagacatatgatcttagctcatcacggtaagttagagtttggttcaccaaaaatg
ccacatttaaaagaagccgagattctattttttatagataatatagatgctaaaatgaac
atgtttgaaaaagcatttaagaaaacggataaaggtcaatttacagagcgaatttttggt
cttgaaaatagacaattctacaatcctatacaattagattaa
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