Sulfitobacter donghicola: SD1155_11510
Help
Entry
SD1155_11510 CDS
T05893
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sdo
Sulfitobacter donghicola
Brite
KEGG Orthology (KO) [BR:
sdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdo03009
]
SD1155_11510
Enzymes [BR:
sdo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
SD1155_11510
Ribosome biogenesis [BR:
sdo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SD1155_11510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_15
Methyltransf_31
Cons_hypoth95
Methyltransf_25
TRM5-TYW2_MTfase
PrmA
MTS
TRAM
N6_N4_Mtase
Methyltransf_11
MethyltransfD12
TPMT
Methyltransf_4
PDGF
Motif
Other DBs
NCBI-ProteinID:
QAV32150
LinkDB
All DBs
Position
complement(2377601..2379001)
Genome browser
AA seq
466 aa
AA seq
DB search
MICPNLFICGGNKVETLKKNDVLTGQVVDLTHEGHGVVKIDRYPIFIPNTLIDETIEYKV
IKVKKNFAIGKLIKVITESDARVEPPCIYYYKCGGCQLQHMSYQAQLNMKKEQVVNLFHR
KAKFTNTVIKDVVGMEDPWRYRNKSQIPVGLSKDQLPIMGFYRQRSHDIIDMDSCLIQDQ
QHQQVMNDVKQLISDLNISIYNEKTKKGLLRHLVVRTGHYTNQLMIILVTNGKAFKQAES
MVDALVRKYPNITSIKQNINDAHSNVIMGRHSMTIYGEEEIEDQLSEITFNISDQSFYQI
NSHQTEKLYQQALDYAQLTGNEIVLDTYCGIGTIGLYMARNAKHVYGVEVVSSAIKDANR
NATINQLENTTFVCGKAEEVILKWKAEGIRPDVVMVDPPRKGCDETFLETLLELNPKRIV
YISCNPSTQQRDAHILNHQYDLKEITPVDMFPQTTHIETVALFERK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgatatgtcctaacctttttatatgtgggggaaataaagtggaaacattgaagaaaaat
gatgtactaacaggccaggttgtagatttaacacatgaaggccatggcgttgtaaaaatt
gatagatatccgatatttatcccaaatacgttaatagacgagacgatcgaatataaagtg
attaaagtaaagaaaaactttgcaattggaaaattaataaaagtgattactgaaagtgat
gctagagtagagccgccatgtatatattattataagtgcgggggatgccaacttcagcat
atgtcttatcaagcacaactcaatatgaaaaaagaacaggtagttaatttattccataga
aaagcaaaatttacaaatacagttatcaaagatgttgttggcatggaagacccttggcga
tatagaaataaatcccaaattccagttggtttaagtaaggatcagttacccataatgggg
ttttatcgtcaacgaagtcatgacatcattgatatggatagttgtttaattcaagatcaa
caacatcaacaagtgatgaacgatgttaaacaacttatatcggatttaaatataagtatt
tataatgaaaagactaaaaaaggattacttcgtcatttagtagtgagaacaggacattat
acgaatcaattaatgattatattagtgactaatggtaaggcattcaaacaagctgaatct
atggtagatgcactagttcgaaaatatcccaatatcacaagtattaaacaaaatattaat
gatgcgcattcaaatgtgatcatgggacgtcactccatgacgatttatggtgaagaagaa
atcgaagatcaattaagcgaaatcactttcaatattagtgatcaatcattctatcaaata
aattcacatcaaacagaaaaattatatcaacaagcattagattatgcccaattaacaggt
aatgaaattgttcttgatacatactgtggtatcggaacaattggtttgtacatggctaga
aatgctaaacacgtttatggtgtcgaagtggtatcatctgcgattaaagatgcaaatcga
aatgcgactataaaccaattagaaaatacaacttttgtctgtgggaaagctgaagaagtt
attttaaaatggaaagcagaaggaataagaccagatgttgttatggtcgatccaccaaga
aagggttgcgatgaaacgttcttagaaacattattagaacttaatcctaaacgaattgta
tatatatcatgtaatccgtctacgcaacaacgtgatgcacacatacttaatcatcaatat
gatttaaaagaaataacacctgttgatatgttcccgcaaacaacgcatattgaaacagtg
gcattatttgaaagaaaataa
DBGET
integrated database retrieval system
