Sulfitobacter donghicola: SD1155_11700
Help
Entry
SD1155_11700 CDS
T05893
Name
(GenBank) YSIRK signal domain/LPXTG anchor domain surface protein
Organism
sdo
Sulfitobacter donghicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_56
DUF6475
Motif
Other DBs
NCBI-ProteinID:
QAV32186
LinkDB
All DBs
Position
complement(2415881..2421424)
Genome browser
AA seq
1847 aa
AA seq
DB search
MANAAEINQPNEIEINYTNSKVIEDKQDEKQLNQNNEKINETPNGTPNNTNNEAAQKMDH
KQVTSNQSISGNNDQLKQLIQQYKKINLDDKTDESIKEFSNDISNAEKFLQNQSTQSEID
DYYRNFINSASKLKRKKNNNEFQIRKEQNDNKGIPATNTEPSRNNQHSHVVRQSNGTSFR
AVPNQNSNDPLKYNETNTGVINGHFDQVSGGNLPNQNTSLTVVKDVIGWTSLSTDPDKEF
PIVMTTKVRNYPTFMSDSSAPYGVVLARTTDGFERRVPDPRVAGIYQDIDVAPNSELVVD
FISSALATINAWPGVKAKITTPDGNRVLFDKQINGMGKYPTGKLNLMINIPSDVNRVRLS
FIPISNSYTLTSNQTSSAYGFGDNPNYMYGGAVSRVNVNSGAYVVSRVTEVKYDFTSESS
TSNYARGTITVILENKGHTSSNETIYRVTLPQGTKFVSATNASTNYNEATSLLTLNAGKV
AAGTTKTISYTVDFPAIKPSIVDLDGNVTYRTDASFRGNDRQKSGIDEVEQQQVAILMYK
EDLRNKYNDTKQYLDTINEADYTTVSVNNLKLKLDEAKAILDEANNNVPMADRKNQDFIN
QITTEIEHEKIKLKRLTPSTPVMTTNEANASLTVTPQGDSDKMTVHYIAPNGDTKEVIAT
KAGNQWRLNDTPTGFSIDNTNGSVTVNYQGVQNGSEVSAYDTSGNSDPSDEVRKNVPLKQ
NTPPEPVITPDEANASVTVTPQGDADKMTVHYVAPNGDAKEVIATKTGDQWTLNDTPTGI
SIDNTSGAVTVNYQGVQNGSEVTANESYGNSDASPEARANMPVKEATPTAPLITPDEADA
SVTVTPQGDADKMTVHYVAQNGDPKEVIATKTGDQWTLNETPTGISIDNTSGAVTVSYQG
IQNGSEVTANESHGNSDASPEARANVPVKEATPAAPTISPDEANVSVTVTPQGDSDKMTV
HYIAPNGDAKEVVATKVGNQWTLNETPTGISIDNTNGAVTVNYQGVQNGSEVSTSETHGN
SDASPEARANVPVKEATPMAPVITPDEANASVTVTPQGDADKMTVHYIAPNGDPKEVIAT
KVGNQWTLNETPTGISIDNTSGAVTVGYQGVQNGSEVSASETHGNSDASIEARANVPVKE
ATPTAPVITTDEANASVTVTPQGDADKMTVHYVAPNGDAKEVVATKVGNQWTLNETPTGI
SIDNASGAVTVNYQGVQNGSEVSASETRGNSDASPEARANVPLKEATPTAPVITPDEASA
SVTVTPQADADKMTIHYVAPNGDTKEVIATKTGNQWTLNETPTGISIDNTSGAVTVGYQG
VQNNSEVSASETHGNSDASPEARANVPVKEATPMAPVVTQDEANASVTVIPQGDSDKMTV
QYIAPNGDPKEVVATKVDNQWTLNEVPTGISIDNMNGAVTVNYQGVQNGSEVSASETHGN
SDASPEARANVPVKEATPKAPTIISDETNASVTVVPQGDADKMTVHYVAPNGDPKEVVAT
KVGNQWTLNEVPTGISINNSNGAITVGYQGIQNGSEVSASETHGNSDASTEAHANVPLKE
ATPKAPTIISDEASASVTITPQSDADKMIIHYVSPNGDPKEVIATKVGNQWTLNDTPTGI
SIDNASGAVTVNYLGVQKRSEVGASETHDNSDPSEKIVANVPVKQSKPMPPIITWDRDKK
SVSIKPNGKIDKMKIQIISSANNADKELIATKVDNQWKLNKKMNGIQIDRKTGTVTIDYQ
MSQNFKELLVSSTFGNSDESEIIHFIIPKFKGLVYDLNNYNKQENSVYEFENENIKKQSV
IKKQVKASKIELPNTGKKQTKEKGNASIVLLLFGLILCKLKLKRKDL
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgcagcagaaatcaatcaacctaatgaaatagaaattaactatacaaatagt
aaagtgattgaagataagcaagatgagaaacaacttaatcaaaataacgaaaaaataaat
gaaacaccaaatggaacaccaaataatacaaacaatgaagcagcgcaaaaaatggatcat
aaacaggtgacttctaatcaatcaataagtggaaataatgatcaattaaaacaattaatt
caacagtataaaaaaataaatttagatgataaaacagatgaatcaataaaagaatttagc
aatgatatttctaatgctgaaaaatttttacaaaatcaatctactcaatcagaaattgat
gactattacagaaattttattaacagtgcatctaaattaaaaagaaaaaagaataataat
gaatttcaaattagaaaagaacaaaatgacaataaaggtataccagcaacaaatacagaa
ccatcaagaaataatcaacattctcacgttgtacgacaatcaaacggtacaagttttaga
gctgtacctaatcaaaacagcaatgacccattaaaatacaatgaaactaatacaggtgtg
attaacggacactttgatcaagtttctggagggaatttacccaatcaaaatacaagttta
acggttgttaaagatgttataggatggacgagtttatctacagatccagataaagaattt
ccaattgtaatgactactaaagttagaaactacccaacatttatgagtgatagttctgcg
ccttatggtgtcgtgctagcaagaactacagatggatttgaaagacgtgtacctgaccct
agagtagctggtatttatcaagatattgatgttgcacctaattcagaattagtcgtagat
ttcatatcatcagctttagcaacaattaatgcttggcctggtgtaaaagccaaaattaca
acgccagacggtaatcgagtattatttgataaacaaataaatggtatgggtaaataccca
actggaaagcttaatctcatgattaatataccgagtgatgttaacagagttagactatct
tttattccaatttcaaattcatacacattaacttctaaccaaacaagtagtgcgtatggt
tttggagataatccaaattacatgtatggtggtgctgttagtagggttaatgttaatagt
ggtgcttatgttgtatctagagtaactgaagtcaaatacgattttacgagtgaatcatca
acttcaaattatgcacgtggcacgattacagtaattcttgaaaataaaggtcatacaagc
tcaaatgaaactatttatcgagtaacattacctcaaggaacaaaatttgtttctgcaaca
aacgcgagtacaaactataatgaggcaacaagtttattaacgcttaatgcaggaaaagta
gctgctggcaccactaagacgatatcgtatacagttgattttccagctattaaaccaagt
attgtagatttagatggaaatgtaacttatagaacagatgcttcattccgaggaaatgat
agacaaaaatcaggtatagatgaagtagagcaacaacaagttgcgatattaatgtataaa
gaagacttaagaaacaaatataatgatacgaaacaatatttggatacaattaatgaagcc
gattatacaacagtttcagttaataatttaaaactaaaacttgatgaagcaaaagctatt
ttagatgaagctaacaataatgtgccaatggcagatagaaaaaatcaagattttatcaat
caaattactacagaaattgaacacgaaaaaatcaaacttaaacggcttacaccttctaca
ccagtaatgactactaatgaagcaaatgcaagtttaacggttactccacaaggagattct
gataagatgacagtgcactatattgcgccaaatggagatactaaggaagttattgctact
aaagcaggaaatcaatggagattgaatgacacaccaacaggttttagtattgataataca
aatggttctgtgacagtcaattatcaaggtgtacaaaacggaagtgaagtttctgcatat
gatacaagtggtaatagtgacccaagtgatgaggttagaaaaaatgttcctttaaaacaa
aatacaccaccagaaccagtgataacaccagatgaagcaaatgcaagtgtaacagttaca
ccacaaggtgatgcagataagatgaccgtgcattatgtggcaccgaatggagatgcgaag
gaagtaatcgcaacaaaaacaggagatcaatggacactaaacgatacaccgactggaata
agtattgataatacaagtggcgcagtaacagtgaattaccaaggcgttcaaaatggaagt
gaagtcacagccaatgagagttatggcaacagtgatgcaagtccagaagcgagagcaaat
atgccagtgaaagaagcaacgccaacggcgccattgataacaccagatgaagcggatgcg
agtgtaacagtcacaccacaaggtgatgcggataagatgactgtacattatgtggcacag
aatggcgatccaaaagaagttatcgcaacaaagacaggcgatcaatggacactaaacgag
acaccaacaggaattagtatcgataatacaagtggcgcagtgacagtaagctatcaaggt
atccaaaacggaagtgaagtcacagccaatgagagtcatggcaatagtgatgcaagtcca
gaagcgagagcgaatgtaccggtgaaagaagcaacgccggcggcgccaacaatttcacca
gacgaagcgaatgtaagtgtaacagtcacaccacaaggtgattcagataagatgacagtg
cattacattgcgccaaatggagatgcgaaggaagttgtcgcaactaaagtaggcaaccaa
tggacattaaatgagacaccgactggaataagtatcgataacacgaatggcgcagtgaca
gtgaattaccaaggcgttcaaaatggcagcgaagtaagcacgagtgaaacacatggcaat
agtgatgcaagtccagaagcgagagcgaatgtaccggtgaaagaagcaacgccaatggcg
ccagtgataacaccggatgaagcaaatgcgagtgtaacagttacaccacaaggtgatgca
gataaaatgacggtgcactatattgcgccaaacggcgatccaaaagaagttatcgcaact
aaagtaggcaatcagtggacattaaacgagacaccgactggtatcagtatcgataacaca
agtggcgcagtaacagtaggctatcaaggtgtccaaaatggtagcgaagtcagcgcaagc
gaaacccacggtaacagtgacgcaagtatagaagcgagagcaaatgtgccagtgaaagaa
gcaacgccgacggcgccagtgataacaacagatgaagcaaatgcgagtgtaacagttaca
ccacaaggtgatgcggataaaatgacggtgcattatgtggcaccaaatggagatgcgaag
gaagttgtcgcaactaaagtaggtaatcaatggacattaaatgagacaccgactggaata
agtattgataatgcgagcggtgcagtgacagtgaattaccaaggcgtccaaaatggtagt
gaagtaagtgcaagcgaaacccgcggcaatagtgacgcaagtccagaagcgagagcgaat
gtaccattgaaagaagcaacgccaacggcgccagtgataacaccagatgaagcgagtgca
agtgtaacagtcacaccacaagctgatgcagataaaatgacaattcattatgtagcgcca
aatggagatacgaaggaagtaatcgcaacaaaaacaggtaaccaatggacattaaatgag
acaccgactggaataagtattgataatacaagtggagcagtaacagtaggttatcaaggc
gtacaaaacaatagcgaagtcagtgcaagcgaaacacatggtaatagtgatgcgagtcca
gaagcgagagcgaatgttccagtgaaagaagcaacgccgatggcgccagttgttacccaa
gacgaagcaaatgcgagtgtaacggtaataccgcaaggtgattcagataagatgacagta
cagtatattgcgccaaacggcgatccaaaagaagttgtggcaaccaaagtagacaatcaa
tggacattaaatgaagttccaacaggaattagtatcgataacatgaatggcgcagtgaca
gtgaattaccaaggagttcaaaatggtagcgaagtaagcgcgagtgaaacccacggtaac
agtgatgcaagtccagaagcgagagcgaatgtaccagtgaaagaagcaacaccaaaagca
ccaacgatcatatctgatgaaacgaacgcgagtgtaacggtagtaccgcaaggtgatgcg
gataagatgaccgtacattatgtggcaccaaatggcgatccaaaagaagttgtcgcaacc
aaagtaggcaaccaatggacattaaatgaagttccaacaggaattagtatcaacaattcg
aacggtgcgataacagtaggttatcaaggtatccaaaacggtagcgaagtaagtgcaagc
gaaacacatggtaatagtgacgctagcactgaagcacatgcaaatgtaccattaaaagaa
gcaacaccaaaagcaccaacgatcatatctgatgaagcgagtgcgagtgtaacaattaca
cctcaaagtgatgcggataagatgataattcactacgtctcaccaaacggcgatccaaaa
gaggttatcgcaactaaagtaggcaaccaatggacattaaatgatacaccaacaggaata
agtattgataatgcgagtggagcagtaacagttaattatctaggcgtccaaaaaagaagt
gaagtaggtgcgagtgaaacccatgacaatagtgatccaagtgaaaaaatagttgctaat
gttcctgtgaaacaaagtaaacctatgccgccaataatcacatgggatagagataaaaaa
tcagtttctattaaaccaaatgggaaaatagataagatgaaaatacaaattataagttcg
gctaataatgctgataaagaacttattgcgacaaaagttgataatcagtggaaacttaat
aagaaaatgaatggaattcaaatagatcgtaaaactggtacagttacaattgattatcaa
atgtcccaaaatttcaaagaattactagtaagtagtacattcgggaatagcgatgaaagt
gaaattattcattttataattccgaaatttaaaggtttggtttatgacctaaataattac
aacaaacaagaaaattcagtttatgaatttgaaaatgaaaatattaaaaaacaatctgta
attaagaaacaggtgaaagcaagcaaaatagaattgccgaatactggaaagaaacaaacg
aaggaaaaaggaaacgctagtattgttttattactttttgggttaatactttgtaaatta
aaattgaaaagaaaagacttatag
DBGET
integrated database retrieval system
