Sulfitobacter donghicola: SD1155_11820
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Entry
SD1155_11820 CDS
T05893
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sdo
Sulfitobacter donghicola
Pathway
sdo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SD1155_11820 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdo03019
]
SD1155_11820 (groL)
03110 Chaperones and folding catalysts [BR:
sdo03110
]
SD1155_11820 (groL)
03029 Mitochondrial biogenesis [BR:
sdo03029
]
SD1155_11820 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdo04147
]
SD1155_11820 (groL)
Enzymes [BR:
sdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SD1155_11820 (groL)
Messenger RNA biogenesis [BR:
sdo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SD1155_11820 (groL)
Chaperones and folding catalysts [BR:
sdo03110
]
Heat shock proteins
HSP60 / Chaperonin
SD1155_11820 (groL)
Mitochondrial biogenesis [BR:
sdo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SD1155_11820 (groL)
Exosome [BR:
sdo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SD1155_11820 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SD1155_11820 (groL)
Exosomal proteins of breast cancer cells
SD1155_11820 (groL)
Exosomal proteins of colorectal cancer cells
SD1155_11820 (groL)
Exosomal proteins of bladder cancer cells
SD1155_11820 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Relaxase_C
Motif
Other DBs
NCBI-ProteinID:
QAV32207
LinkDB
All DBs
Position
complement(2437585..2439207)
Genome browser
AA seq
540 aa
AA seq
DB search
MAKDLKFSEDARQAMLRGVDKLANAVKVTIGPKGRNVVLDKEYTAPLITNDGVTIAKEIE
LEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEGLKNVTSGANPVGLRQGID
KAVQVAVEALHEISQKVENKNEIAQVGAISAADEEIGKYISEAMEKVGNDGVITIEESSG
FNTELEVVEGMQFDRGYQSPYMVTDSDKMIAELERPYILVTDKKISSFQDILPLLEQVVQ
SNRPILIVADEVEGDALTNIVLNRMRGTFTAVAVKAPGFGDRRKAMLEDLAILTGAQVIT
DDLGLELKDASIDMLGSANKVEVTKDNTTVVDGDGDENNIDARVNQIKAQIEETDSDFDR
EKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNI
YKKVSEIDATGDVETGVNIVLKALQAPVRQIAENAGLEGSIIVERLKNADAGVGFNAATN
EWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAVVATIPEKDQSEQAGMSGGMPGMM
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagatttaaaattctcagaagacgcacgtcaagcaatgttacgtggtgtagat
aaattggcaaatgccgtgaaagtgacaattggaccaaaaggacgcaatgttgtattagat
aaagaatatacagcgccgttaattacaaatgatggtgttacaattgcaaaagaaattgaa
ttagaagatccgtatgaaaatatgggcgcaaaattagttcaagaagtagctaacaaaacg
aatgaaattgctggtgatggtactacaactgcaacagtattagcacaagcaatgattcaa
gaaggattaaaaaacgtaactagtggtgcaaaccctgtaggtttaagacaaggtattgat
aaagcagttcaagtagcggttgaagctttacatgagatttctcaaaaagtagaaaataaa
aatgaaattgctcaagtaggtgccatttctgcagcagatgaagaaattggtaaatatatt
tcggaagctatggaaaaagtaggcaatgacggtgttattactatagaagaatctagtggt
tttaatactgaattagaagttgtagaaggtatgcagtttgatagaggttaccaatcacca
tatatggtcactgactcagataaaatgattgcggaattagaacgcccatatattttagtt
actgataagaaaatttcttctttccaagatattttacctttattagaacaagttgttcaa
tctaatcgtccaattttaattgtagctgatgaagtagaaggcgatgcattaactaatatt
gtattaaaccgtatgagaggtacatttacagcagtagcagttaaagcaccaggatttgga
gatcgtcgtaaagcaatgttagaagacttagcaatcttaacaggtgcacaagtcattaca
gatgatttaggattagaattaaaagatgcttcaattgatatgttaggtagcgctaataaa
gttgaagttactaaagataatacgactgtcgttgatggagacggtgatgaaaataatatc
gatgcaagagttaaccaaatcaaagcacaaattgaagaaactgattctgactttgataga
gaaaaactacaagaacgtcttgctaaattagctggtggtgttgcagtaatcaaagtaggt
gctgctagtgaaactgaattaaaagaacgcaaattacgtattgaagatgctttaaactca
actagagcagctgttgaagaaggtatcgtagctggtggtggaacagcgttagtaaatatt
tataaaaaagtaagcgaaattgatgcaactggcgatgttgaaacaggcgttaatattgtt
ctaaaagcattgcaagcaccagttagacaaattgcagaaaatgctggcttagaaggttcc
attattgtagaacgtcttaaaaatgcagatgcaggcgttggcttcaatgcagcaacaaat
gaatgggttaatatgcttgaagaaggtattgtagaccctaccaaagtaacacgttcagca
ttacaacatgcagcaagtgtagcagcaatgttcttaacaacagaagcagtagtagcaact
attccagaaaaagatcaatcagaacaagctggaatgagtggcggcatgcctggtatgatg
taa
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