Sphingomonas donggukensis: M9980_00545
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Entry
M9980_00545 CDS
T08944
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
sdon
Sphingomonas donggukensis
Pathway
sdon00010
Glycolysis / Gluconeogenesis
sdon00020
Citrate cycle (TCA cycle)
sdon00260
Glycine, serine and threonine metabolism
sdon00280
Valine, leucine and isoleucine degradation
sdon00310
Lysine degradation
sdon00380
Tryptophan metabolism
sdon00620
Pyruvate metabolism
sdon00630
Glyoxylate and dicarboxylate metabolism
sdon00640
Propanoate metabolism
sdon00670
One carbon pool by folate
sdon00785
Lipoic acid metabolism
sdon01100
Metabolic pathways
sdon01110
Biosynthesis of secondary metabolites
sdon01120
Microbial metabolism in diverse environments
sdon01200
Carbon metabolism
sdon01210
2-Oxocarboxylic acid metabolism
sdon01240
Biosynthesis of cofactors
Module
sdon_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sdon_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sdon_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
sdon_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
M9980_00545 (lpdA)
00020 Citrate cycle (TCA cycle)
M9980_00545 (lpdA)
00620 Pyruvate metabolism
M9980_00545 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
M9980_00545 (lpdA)
00640 Propanoate metabolism
M9980_00545 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
M9980_00545 (lpdA)
00280 Valine, leucine and isoleucine degradation
M9980_00545 (lpdA)
00310 Lysine degradation
M9980_00545 (lpdA)
00380 Tryptophan metabolism
M9980_00545 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
M9980_00545 (lpdA)
00670 One carbon pool by folate
M9980_00545 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdon04147
]
M9980_00545 (lpdA)
Enzymes [BR:
sdon01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
M9980_00545 (lpdA)
Exosome [BR:
sdon04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
M9980_00545 (lpdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
FAD_oxidored
GIDA
NAD_binding_8
HI0933_like
AlaDh_PNT_C
FAD_binding_3
Thi4
Lys_Orn_oxgnase
Lycopene_cycl
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
URW75762
LinkDB
All DBs
Position
117366..118778
Genome browser
AA seq
470 aa
AA seq
DB search
MAEYDFDVLVIGAGPGGYVAAIRAAQLGLKTACAEGRETLGGTCLNVGCIPSKAMLHASE
LYDHAANGTMAKLGIKVTPELDLDTMHGQRRDAVKQLTGGIEFLFKKNKVEWLKGYAAFT
SGDTVQVGDRTVRAKNIVIATGSSVTPLPGVAIDNDAHVVVDSTGALELPKVPEHMVVIG
GGVIGLELGSVWRRLGAKVTCVEFLDQILPGFDGEIRKEANKIFKKQGIEFKLSTKVTGV
AVDGGKATLTLEPAQGGDATTLDADCVLVSIGRKPNTDGLALDKAGLTVNQRGQVEIDHD
FRTSVPGIWAIGDVAPGPMLAHKAEDEGIAVAENIAGQTGIVNHDIIPSVVYTWPEIAGV
GLTEEAAKAKLAETGGEVKVGKFPMMANSRAKTNHEPDGFVKIISDAKTDRVLGAWIIAV
PAGTMIAQVAQAMEFGATSEDIAYTCHAHPTHSEAIKEAAMGVRGKAIHI
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatacgacttcgacgtcctcgtgatcggtgcgggccccggcggctatgtcgcg
gcgatccgcgcggcgcagctggggctgaagaccgcgtgtgccgaggggcgcgagacgctg
ggcggcacgtgcctgaacgtcgggtgcatcccgtcgaaggcgatgctgcatgcgtccgag
ctgtacgaccacgccgccaatgggacgatggcgaagctcggcatcaaggtgacgccggag
ctcgacctcgacaccatgcacggccagcgccgcgatgcggtgaagcagctgaccgggggc
atcgaattcctgttcaagaagaacaaggtcgagtggctgaagggctatgcggcgttcacg
tccggcgacacggtgcaggtcggtgaccgcaccgtgcgcgcgaagaatatcgtcatcgcc
accggatcgtcggtcactccgctgcccggtgttgccatcgacaacgacgcgcatgtcgtg
gtggacagcaccggcgcgctcgagctgccaaaggtgcccgagcatatggtcgtgatcggc
ggcggcgtgatcgggctggagctcggcagcgtctggcggcggctgggagccaaggtcacg
tgcgtcgaattcctcgaccagatcctgcccggcttcgacggtgaaatccgcaaggaagcc
aacaagatcttcaaaaagcagggcatcgagttcaagctgtcgaccaaggttaccggcgtc
gcggtggacggcggcaaggcgacgctgacgctcgagccggcgcagggcggtgacgcgacc
acgctcgacgccgactgcgtgctcgtgtcgatcgggcgcaagccgaacaccgacggcctc
gcactcgacaaggcgggcctgaccgtcaaccagcgcgggcaggtggagatcgatcatgat
ttccgcacgtccgtgccgggcatctgggcgatcggcgacgtcgcacccggcccgatgctc
gcccacaaggccgaggacgagggcatcgcggtcgccgagaatatcgcagggcaaaccggc
atcgtgaaccacgatatcatcccgagcgtcgtctatacctggcccgagatcgccggcgtg
ggtctgaccgaggaagcggccaaggccaagctcgcggaaaccggcggcgaggtgaaggtc
ggcaagttcccgatgatggccaacagccgcgccaagacgaaccacgagccggacggcttc
gtgaagatcatctcggacgcgaagaccgaccgcgtgctcggcgcgtggatcatcgctgtg
cccgccggcacgatgatcgcgcaggtcgcgcaggcgatggaattcggcgcgacgtcggag
gacatcgcctatacctgccacgcgcatccgacccattcggaagcgatcaaggaggccgcg
atgggcgtgcgcggcaaggcgatccacatctga
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