KEGG   Sphingomonas donggukensis: M9980_00545
Entry
M9980_00545       CDS       T08944                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sdon  Sphingomonas donggukensis
Pathway
sdon00010  Glycolysis / Gluconeogenesis
sdon00020  Citrate cycle (TCA cycle)
sdon00260  Glycine, serine and threonine metabolism
sdon00280  Valine, leucine and isoleucine degradation
sdon00310  Lysine degradation
sdon00380  Tryptophan metabolism
sdon00620  Pyruvate metabolism
sdon00630  Glyoxylate and dicarboxylate metabolism
sdon00640  Propanoate metabolism
sdon00670  One carbon pool by folate
sdon00785  Lipoic acid metabolism
sdon01100  Metabolic pathways
sdon01110  Biosynthesis of secondary metabolites
sdon01120  Microbial metabolism in diverse environments
sdon01200  Carbon metabolism
sdon01210  2-Oxocarboxylic acid metabolism
sdon01240  Biosynthesis of cofactors
Module
sdon_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sdon_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sdon_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sdon_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sdon00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    M9980_00545 (lpdA)
   00020 Citrate cycle (TCA cycle)
    M9980_00545 (lpdA)
   00620 Pyruvate metabolism
    M9980_00545 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    M9980_00545 (lpdA)
   00640 Propanoate metabolism
    M9980_00545 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    M9980_00545 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    M9980_00545 (lpdA)
   00310 Lysine degradation
    M9980_00545 (lpdA)
   00380 Tryptophan metabolism
    M9980_00545 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    M9980_00545 (lpdA)
   00670 One carbon pool by folate
    M9980_00545 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdon04147]
    M9980_00545 (lpdA)
Enzymes [BR:sdon01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     M9980_00545 (lpdA)
Exosome [BR:sdon04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   M9980_00545 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored GIDA NAD_binding_8 HI0933_like AlaDh_PNT_C FAD_binding_3 Thi4 Lys_Orn_oxgnase Lycopene_cycl 3HCDH_N
Other DBs
NCBI-ProteinID: URW75762
LinkDB
Position
117366..118778
AA seq 470 aa
MAEYDFDVLVIGAGPGGYVAAIRAAQLGLKTACAEGRETLGGTCLNVGCIPSKAMLHASE
LYDHAANGTMAKLGIKVTPELDLDTMHGQRRDAVKQLTGGIEFLFKKNKVEWLKGYAAFT
SGDTVQVGDRTVRAKNIVIATGSSVTPLPGVAIDNDAHVVVDSTGALELPKVPEHMVVIG
GGVIGLELGSVWRRLGAKVTCVEFLDQILPGFDGEIRKEANKIFKKQGIEFKLSTKVTGV
AVDGGKATLTLEPAQGGDATTLDADCVLVSIGRKPNTDGLALDKAGLTVNQRGQVEIDHD
FRTSVPGIWAIGDVAPGPMLAHKAEDEGIAVAENIAGQTGIVNHDIIPSVVYTWPEIAGV
GLTEEAAKAKLAETGGEVKVGKFPMMANSRAKTNHEPDGFVKIISDAKTDRVLGAWIIAV
PAGTMIAQVAQAMEFGATSEDIAYTCHAHPTHSEAIKEAAMGVRGKAIHI
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggctgaatacgacttcgacgtcctcgtgatcggtgcgggccccggcggctatgtcgcg
gcgatccgcgcggcgcagctggggctgaagaccgcgtgtgccgaggggcgcgagacgctg
ggcggcacgtgcctgaacgtcgggtgcatcccgtcgaaggcgatgctgcatgcgtccgag
ctgtacgaccacgccgccaatgggacgatggcgaagctcggcatcaaggtgacgccggag
ctcgacctcgacaccatgcacggccagcgccgcgatgcggtgaagcagctgaccgggggc
atcgaattcctgttcaagaagaacaaggtcgagtggctgaagggctatgcggcgttcacg
tccggcgacacggtgcaggtcggtgaccgcaccgtgcgcgcgaagaatatcgtcatcgcc
accggatcgtcggtcactccgctgcccggtgttgccatcgacaacgacgcgcatgtcgtg
gtggacagcaccggcgcgctcgagctgccaaaggtgcccgagcatatggtcgtgatcggc
ggcggcgtgatcgggctggagctcggcagcgtctggcggcggctgggagccaaggtcacg
tgcgtcgaattcctcgaccagatcctgcccggcttcgacggtgaaatccgcaaggaagcc
aacaagatcttcaaaaagcagggcatcgagttcaagctgtcgaccaaggttaccggcgtc
gcggtggacggcggcaaggcgacgctgacgctcgagccggcgcagggcggtgacgcgacc
acgctcgacgccgactgcgtgctcgtgtcgatcgggcgcaagccgaacaccgacggcctc
gcactcgacaaggcgggcctgaccgtcaaccagcgcgggcaggtggagatcgatcatgat
ttccgcacgtccgtgccgggcatctgggcgatcggcgacgtcgcacccggcccgatgctc
gcccacaaggccgaggacgagggcatcgcggtcgccgagaatatcgcagggcaaaccggc
atcgtgaaccacgatatcatcccgagcgtcgtctatacctggcccgagatcgccggcgtg
ggtctgaccgaggaagcggccaaggccaagctcgcggaaaccggcggcgaggtgaaggtc
ggcaagttcccgatgatggccaacagccgcgccaagacgaaccacgagccggacggcttc
gtgaagatcatctcggacgcgaagaccgaccgcgtgctcggcgcgtggatcatcgctgtg
cccgccggcacgatgatcgcgcaggtcgcgcaggcgatggaattcggcgcgacgtcggag
gacatcgcctatacctgccacgcgcatccgacccattcggaagcgatcaaggaggccgcg
atgggcgtgcgcggcaaggcgatccacatctga

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