Sphingomonas donggukensis: M9980_00785
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Entry
M9980_00785 CDS
T08944
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sdon
Sphingomonas donggukensis
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdon03016
]
M9980_00785
Enzymes [BR:
sdon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
M9980_00785
Transfer RNA biogenesis [BR:
sdon03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
M9980_00785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
URW75805
LinkDB
All DBs
Position
163894..164514
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AA seq
206 aa
AA seq
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MTVHLHEEDIPAGLFAPGASIAVDTETMGLLTPRDRLCVVQLSDGGPDEHLVRFGPDSDY
AAPNLRALLADRDRLKLYHFGRFDLAAIQFYLEVDASPCYCTKIASRLVRTYTDRHGLKE
LVRELLGQELSKAQQSSDWGAPELTDAQKEYAASDVRYLHRMKVELDRRLEREGRTDLAQ
ACFDFLPHRAALDIEGWPETDIFAHA
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttcatctccacgaagaagacatccccgccggcctgttcgcgcccggcgcgtcg
atcgccgtcgataccgagacgatgggcctgctgaccccgcgcgaccggctgtgcgtcgtc
cagctgtcggacggcggacccgacgagcatctggtgcgcttcggccccgacagcgactat
gcggcgcccaatctgcgcgcgctgctcgccgaccgtgatcggctgaagctctatcatttc
ggtcgcttcgatctcgccgcgatccagttctacctcgaggtcgatgcctcgccctgctat
tgcacgaagatcgcgtcgcggctggtgcggacctacaccgatcgccacgggctgaaggag
ctggtgcgcgaactgctcggacaggaactgtcgaaggcgcagcagtcgtccgactggggc
gcgcccgagctgaccgacgcgcagaaggaatatgccgcctccgacgtccgctatctccac
cgcatgaaggtcgagctcgatcgccggctcgagcgtgaggggcgcaccgatctcgcgcag
gcgtgcttcgacttcctgccgcaccgcgccgcgctcgatatcgagggttggcccgaaacc
gacatcttcgcgcacgcctga
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