Sphingomonas donggukensis: M9980_01005
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Entry
M9980_01005 CDS
T08944
Name
(GenBank) RNA polymerase sigma factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
sdon
Sphingomonas donggukensis
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdon03021
]
M9980_01005
Transcription machinery [BR:
sdon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M9980_01005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
PhyR_sigma-like
Sigma70_ECF
SPOR
MDMPI_N
Motif
Other DBs
NCBI-ProteinID:
URW75844
UniProt:
A0ABY4TXG4
LinkDB
All DBs
Position
209704..210288
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AA seq
194 aa
AA seq
DB search
MKSDYGALSDGELAALAAVGGEAAFREIVRRHSSQVYRLIVGNVSDPDEALDLVQETFIS
AHGALRRFDPSRPMAAWLSVIALNKCRDWARRRTVRRFFAFARPIDEVAGELASDAPGID
VAAADRQELERLRQAITELPTALREPLVLHSVEGMSQADTASVLAITEKAVETRLRRARI
RLAEILARHPPAGH
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtccgactatggcgcgctctcggacggggagctcgcggccctcgcggcggttggc
ggggaagcggccttccgcgagatcgtccgccgccacagcagccaggtctaccgcctgatc
gtcggcaacgtatcggaccccgacgaggcgctggacctggtgcaggagaccttcatctcc
gcccacggcgcgctgcgccgcttcgacccgtcgcgcccgatggctgcatggctgtcggtg
atcgcgctgaacaagtgccgggactgggcgcggcgccggaccgtgcgaaggttcttcgca
ttcgcacggccgatcgacgaggtcgccggcgaactcgcgtccgacgcacccggcatcgac
gtggcggctgccgaccggcaggagctcgaacggcttcggcaggcgatcaccgagctgccg
accgccctgcgcgaaccgctcgtcctgcattcggtcgagggcatgagccaggccgacacg
gcgtcggtgctggcgattacggagaaggccgtggagacacgcctaaggcgcgcccgcatc
cggcttgcagagattctcgcgcgccatccgcctgccggacattga
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