Sphingomonas donggukensis: M9980_02170
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Entry
M9980_02170 CDS
T08944
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sdon
Sphingomonas donggukensis
Pathway
sdon00061
Fatty acid biosynthesis
sdon00071
Fatty acid degradation
sdon01100
Metabolic pathways
sdon01212
Fatty acid metabolism
sdon02024
Quorum sensing
sdon04146
Peroxisome
Module
sdon_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
M9980_02170
00071 Fatty acid degradation
M9980_02170
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
M9980_02170
09145 Cellular community - prokaryotes
02024 Quorum sensing
M9980_02170
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sdon01004
]
M9980_02170
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdon04147
]
M9980_02170
Enzymes [BR:
sdon01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
M9980_02170
Lipid biosynthesis proteins [BR:
sdon01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
M9980_02170
Exosome [BR:
sdon04147
]
Exosomal proteins
Exosomal proteins of breast milk
M9980_02170
Exosomal proteins of breast cancer cells
M9980_02170
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
URW76060
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All DBs
Position
complement(447289..449016)
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AA seq
575 aa
AA seq
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MSDSETAAPEPADPEAIWRSAFLHPGAWDRDFPPLSMVDLFDASATRAPDAPLIDFLGRR
YSYGETQDGANRVACGLKALGYGRGDRIGLFLPNVPHYVAAYYGILKLGATVVNFSPLYT
VDELAHQVADSGTRLLFTLSATALLPTAVKVLEQSALERLVVGSVAGALPATKSFFYRMF
RKSEVAARPDDARITAFSALIANDGACVTPAIDPARDVALIQYTGGTTGVPKGAVLTHQN
LSANARQVAALDPDPQTPDSVLGVLPFFHVFANTCVLNRTVCTGGEIVMLPRFEAGQVLA
AIARTKPRALPGVPTMYQALLDHPKCGHTDFASLRYCISGGAPLSAELKSKFEAATGATV
IEGYGLSESSGVVSCNPYAGPQHPGTIGQPLAATRVRLVDKEDPTRPPPVGEPGEIVLAG
PQIMAGYWQRPDADAEVFVTDAAGTRWLRTGDVGTIDAEGFIRIVDRLKDMIAVGGFKVF
PSQIEALLHHHPAVKEALVIGLPDTYRGEVPRAYVTLNDGFDDAGAALAAWLNPQLGKHE
RVDQVVVRLTMPKTMIGKLSRKDLLAEVMSEGEAA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattccgagaccgccgcacccgaacccgccgacccggaagccatctggcgcagc
gcgttccttcatcccggcgcctgggatcgcgattttccgccgctctcgatggtcgatctg
ttcgacgccagcgcgacgcgcgcgcctgacgccccgctcatcgacttcctcggccgccgc
tacagctatggcgagacgcaggacggcgccaaccgcgtcgcctgcgggctgaaggcgctg
ggctatggccgcggcgaccgcatcgggctcttcctgcccaacgtcccccactatgtcgcg
gcctattacggcatcctcaaactcggcgcgactgtcgtcaatttctcgccgctctacacc
gtcgacgaactcgcccatcaggtcgcggattcgggaacccggctgttgttcacgctctcg
gcaaccgcgctgctgccgaccgcggtcaaggtgctggagcagagcgcgctcgaacggctg
gtcgtcggctcggtcgcgggcgcgctgccggcgaccaagtcgttcttctaccgcatgttc
cgcaagagcgaggtcgccgcgcggcccgacgacgcgcggatcacggccttttccgcgctg
atcgccaacgacggcgcctgcgtgacgcccgcgatcgatccggcgcgcgacgtcgcgctg
atccagtacaccgggggcaccaccggcgtgcccaagggcgcggtgctgacccaccagaac
ctgtcggccaacgcgcgtcaggtcgcagccctcgaccccgatccgcagacgcccgacagc
gtgctcggcgtgctgcccttcttccacgtcttcgccaacacctgcgtcctcaaccggacg
gtgtgcaccggcggagagatcgtgatgctgccgcgtttcgaggcgggacaggtgctggcc
gcgatcgcccggacgaagccgcgcgccctgcccggcgtgccgacgatgtaccaggctctg
ctcgaccatccgaagtgcggacacaccgacttcgcctcgctgcgctactgcatctcgggc
ggcgcgccgctgtcggcggaattgaagtcgaagttcgaggccgcgaccggcgccaccgtg
atcgagggctacggcctgtccgaaagctcgggggtggtctcgtgcaatccctacgccggg
ccgcagcatcccggcacgatcggccagccgctggccgccacacgcgtgcgcctggtcgat
aaggaagacccgacccgcccgccgccagtcggcgagcccggagagatcgtgctggccggc
ccgcagatcatggccggctactggcagaggcccgacgccgatgccgaggtgttcgtcacc
gacgccgccggcacccgctggctgcgcaccggcgatgtcggcacgatcgatgcggaaggc
ttcatccgcatcgtcgaccggctgaaggacatgatcgcggtcgggggcttcaaggtcttc
cccagccagatcgaggcgctgctccaccaccaccccgcggtgaaggaggcgctggtcatc
ggcctgcccgacacctaccgcggcgaagtcccccgcgcctacgtcacgctgaacgacggc
ttcgacgacgcgggcgcggcgctcgcggcgtggctcaatccacaactcggcaagcacgaa
cgcgtcgatcaggtggtggtgcgcctgacgatgcccaaaacgatgatcggcaagctcagc
cgaaaggacttgctggccgaggtgatgtcagagggtgaagccgcgtag
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