KEGG   Sphingomonas donggukensis: M9980_02510
Entry
M9980_02510       CDS       T08944                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sdon  Sphingomonas donggukensis
Pathway
sdon00010  Glycolysis / Gluconeogenesis
sdon00020  Citrate cycle (TCA cycle)
sdon00260  Glycine, serine and threonine metabolism
sdon00280  Valine, leucine and isoleucine degradation
sdon00310  Lysine degradation
sdon00380  Tryptophan metabolism
sdon00620  Pyruvate metabolism
sdon00630  Glyoxylate and dicarboxylate metabolism
sdon00640  Propanoate metabolism
sdon00670  One carbon pool by folate
sdon00785  Lipoic acid metabolism
sdon01100  Metabolic pathways
sdon01110  Biosynthesis of secondary metabolites
sdon01120  Microbial metabolism in diverse environments
sdon01200  Carbon metabolism
sdon01210  2-Oxocarboxylic acid metabolism
sdon01240  Biosynthesis of cofactors
Module
sdon_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sdon_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sdon_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sdon_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sdon00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    M9980_02510 (lpdA)
   00020 Citrate cycle (TCA cycle)
    M9980_02510 (lpdA)
   00620 Pyruvate metabolism
    M9980_02510 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    M9980_02510 (lpdA)
   00640 Propanoate metabolism
    M9980_02510 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    M9980_02510 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    M9980_02510 (lpdA)
   00310 Lysine degradation
    M9980_02510 (lpdA)
   00380 Tryptophan metabolism
    M9980_02510 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    M9980_02510 (lpdA)
   00670 One carbon pool by folate
    M9980_02510 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdon04147]
    M9980_02510 (lpdA)
Enzymes [BR:sdon01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     M9980_02510 (lpdA)
Exosome [BR:sdon04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   M9980_02510 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 NAD_binding_8 FAD_oxidored HI0933_like GIDA AlaDh_PNT_C DAO FAD_binding_3 Lys_Orn_oxgnase 2-Hacid_dh_C 3HCDH_N UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: URW76123
LinkDB
Position
517480..518880
AA seq 466 aa
MADTYDLIVLGSGPGGYVAAIRAAQLGMKTAIVERENLGGICLNWGCIPTKALLRSAEIF
HYMQHAKDYGLVAEKISADLDAVVKRSRGVAKQLNQGVTHLMKKNKIAVHMGTGKLTGKG
RLTVTAADGKTTELTAKNIIVATGARARDLPGTPADGKRVWTYRHAMVPTEMPRKLLVIG
SGAIGIEFASFYNDMGAEVTVVEMMDRIVPVEDADVSAFLEKALKKQGMTILTGAGVSDI
KVGGASVTAKLKDKAGKVTDAEFSHVIVAIGIVPNTADIGLKELGVAVDDRGFLKTDATC
RTNVEGIYAIGDITAPPWLAHKASHEGVIAVEAIAGKHPHAMDPLNIPGCTYCHPQVASV
GLTEAKAKEAGYELKVGTFPFIGNGKAIALGEAEGFIKTVFDAKTGELLGAHMVGAEVTE
LIQGYTVGKQLETTEAELMETVFPHPTLSEMMHESVLAAYGRQLHM
NT seq 1401 nt   +upstreamnt  +downstreamnt
ttggctgacacctacgacctcatcgtgctcggctccgggccgggcggctatgtcgcggcg
atccgcgcggcgcagctggggatgaagaccgcgatcgtcgagcgcgagaatctgggcggc
atctgcctgaactggggctgcatcccgaccaaggcgctgctgcgctcggcggagatcttc
cactatatgcagcacgccaaggactatgggctggtcgccgagaagatcagcgccgacctg
gacgcggtggtgaagcgctcgcgcggggtcgcgaagcagctcaatcagggcgttacgcac
ctgatgaagaagaacaagattgcagtccacatgggcaccggcaagctgaccgggaagggc
aggctgaccgtcaccgccgcggacggcaagacgaccgagctgaccgcgaagaacatcatc
gtcgccaccggcgctcgcgctcgcgatctgcccggcacccctgccgacggcaagcgcgtg
tggacctatcgccacgcgatggtgccgaccgagatgccacgcaagctgctggtcatcgga
tcgggcgcgatcgggatcgaattcgcgagcttttacaacgacatgggcgccgaggtgacc
gtggtcgagatgatggaccggatcgtgccggtcgaggacgccgacgtctccgccttcttg
gaaaaggcactgaagaaacagggcatgacgatcctgacgggtgcgggcgtgtccgacatc
aaggtcggcggcgcgagcgtgaccgcgaagctgaaggacaaggccggcaaggtcaccgac
gccgaattcagccacgtcatcgtcgcgatcggcatcgtgcccaacaccgccgacatcggc
ttgaaggaactgggcgtcgcggtggacgaccgcggcttcctgaagaccgacgcaacctgc
aggaccaatgtcgaggggatttacgcgatcggcgacatcaccgcgccgccgtggctggcg
cacaaggcgagccacgagggcgtgatcgcggtcgaggcgatcgcgggcaagcatccgcac
gcgatggacccgctgaacatccccggctgcacctattgccacccccaggtcgccagcgtc
ggcctgaccgaggcgaaggcgaaggaggcgggctacgagctgaaggtcggcaccttcccg
ttcatcggcaacggcaaggcgatcgcgctcggcgaagcggaaggcttcatcaagacggtg
ttcgacgcgaagaccggcgagctgctgggtgcgcatatggtcggggccgaggtgaccgag
ctgatccagggctataccgtcggcaagcagctcgagacgaccgaggcggagctgatggaa
acggtgttcccgcacccgacgctatccgaaatgatgcacgaaagcgtgctggccgcctac
ggacgccagctgcacatgtga

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