Sphingomonas donggukensis: M9980_03105
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Entry
M9980_03105 CDS
T08944
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
sdon
Sphingomonas donggukensis
Pathway
sdon02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
M9980_03105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdon02000
]
M9980_03105
02044 Secretion system [BR:
sdon02044
]
M9980_03105
Transporters [BR:
sdon02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
M9980_03105
Secretion system [BR:
sdon02044
]
Type I secretion system
Adhesin protein transporter
M9980_03105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_29
Zeta_toxin
AAA_22
MMR_HSR1
AAA_16
Motif
Other DBs
NCBI-ProteinID:
URW76228
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Position
621874..623619
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AA seq
581 aa
AA seq
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MSFPETHGHDGHPGVRPPRFAAWLAEPMLRNKSVYLKVAVAAAMINLFGLVVSLFTMTVY
DRVVPNMAFSSLTALSIGVGIVLVFDFVLRILRAYFVDIAGADIDREIGGNVFDRLMRIR
LDTKKSSTGALAGMMRELETLRDFFASASMTALVDVPFIVITLIFIAVIGGWLVMVPLLV
VPLIVGAGYFTQPAMDRLSARSMREGQQKQSVLFESIGSLEMVKSANAAPLLRRRWLRAI
DDHADSSLRGRLVSTIAVTIASSGNSIAYVGVVIVGVFLIASHDLTTGGLIACSILAGRA
VQPLGTIAQLLTRLSATRTAYKQIDTMMQTAPEGPTSGALHPARLQGAVEFRGVEFKYPG
AAERTLNGVSFAIRPGEKVALLGRVGSGKSTLLRLLLGLYEPQDGLVMIDGTDIRQFDPV
ALRSQMGVAIQDPVLLSGSVRENILLDRAGHGDEEMLRVSELSGSHGFMGQIANGYDLKL
ADRGEGLSGGQRQSITIARALVGNPSILLFDEPTSAMDAQTETALIDRLQEELAGRTMLL
VSHRNALLRLVDRIIIIEGGRVAHDGPRDQVLAALQRPRAA
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcccgagacccacggccacgatggtcatcccggcgtccgcccgccgcgcttt
gccgcctggctcgccgagccgatgctacgcaacaaatcggtctatctgaaggtcgcggtc
gcggcggcgatgatcaacctgttcggcctcgtcgtgtcgctgttcaccatgacggtgtac
gaccgcgtcgtcccgaacatggcgttttcttcgctgacggcgctatcgatcggcgtcggc
atcgtgctggtgttcgatttcgtgctgcggatcctgcgtgcctatttcgtcgatatcgcc
ggcgccgacatcgaccgcgagatcggcggcaacgtgttcgaccggctgatgcgcatccgc
ctcgacacgaagaagagctcgaccggcgcgctcgccggcatgatgcgcgagctggagacg
ctgcgcgacttcttcgccagcgcatcgatgaccgcgctggtcgacgtgccgttcatcgtc
atcacgctgatcttcatcgcggtgatcggcggctggctggtgatggtgccgctgctggtc
gtgccgctgatcgtcggcgcggggtatttcacccagcctgcgatggatcgcctctcggcg
cgttcgatgcgcgaggggcagcagaaacagtcggtgctgttcgaatcgatcggcagcctg
gaaatggtgaagtccgccaacgccgcgccgctgctccgccgccgctggctgcgcgcgatc
gacgaccatgccgacagctcgctgcgcgggcgcctggtgtcgacgatcgcggtgacgatc
gcttcgtcgggcaattcgatcgcctatgtcggcgtcgtcatcgtcggcgtcttcctgatc
gcgtcgcacgacctgacgaccggcgggctgattgcctgttcgatcctggcggggcgcgcg
gtccagccgctcggcacgatcgcgcagctgctgacccgcctgtcggcgacacgcactgcg
tacaagcagatcgatacgatgatgcagaccgcgcccgaagggccgacgagcggtgcgctt
caccccgcgcggttgcagggcgcggtcgaattccgcggcgtcgagttcaaatatccgggc
gctgccgagcgcacgctgaacggcgtcagcttcgcgatccgtccgggcgagaaggtcgcg
ctgcttggccgcgtcgggtcgggcaagtcgacgctgctgcgcctgctgctcggcctctac
gagccgcaggacgggctcgtgatgatcgacggcaccgacatccgccagttcgatccggtc
gccctgcgcagccagatgggcgtggcgatccaggatccggtattgctgtccggatcggtg
cgcgagaacatcctgctcgaccgcgccggccacggtgacgaggagatgctgcgggtttcc
gaactgtcgggaagccacggcttcatggggcagatcgccaacggctacgacctgaagctg
gccgatcggggcgagggattgtcgggcggacagcgccagtcgatcaccatcgcccgcgcg
ctggtcggcaatccgtcgatcctgctgttcgacgaaccgacgagcgcgatggacgcgcag
accgaaaccgcgctgatcgaccggttgcaggaggagctggccgggcggacgatgctgttg
gtgtcgcaccgcaacgcgctgctccgcctggtcgaccgcatcatcatcatcgaggggggc
cgcgtcgcgcacgacggcccgcgcgaccaggtgctcgccgccctccagcgcccccgcgca
gcctga
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