Sphingomonas donggukensis: M9980_03320
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Entry
M9980_03320 CDS
T08944
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sdon
Sphingomonas donggukensis
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdon03032
]
M9980_03320
03036 Chromosome and associated proteins [BR:
sdon03036
]
M9980_03320
03400 DNA repair and recombination proteins [BR:
sdon03400
]
M9980_03320
DNA replication proteins [BR:
sdon03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
M9980_03320
Chromosome and associated proteins [BR:
sdon03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
M9980_03320
DNA repair and recombination proteins [BR:
sdon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
M9980_03320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
URW76269
LinkDB
All DBs
Position
667530..667802
Genome browser
AA seq
90 aa
AA seq
DB search
MNKQELIGQVADMSGLGKGDAVKAVEAVFDVITASLKKGDEVRLVGFGTFSISKRKASTG
RNPRTGEPMTIKASTQPKFKAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaggaattgatcggccaggtcgcggacatgtccggcctgggcaagggggat
gcggtcaaggcggtggaggcggtgttcgacgtcatcaccgcgtcgctgaagaagggggac
gaggtgcgcctggtcggcttcggcaccttctcgatctcgaagcgcaaggcatcgacgggc
cgcaacccgcgcaccggcgaaccgatgacgatcaaggcatcgacgcagccgaagttcaag
gcgggcaagggcctgaaggacgcggtcaactga
DBGET
integrated database retrieval system
