Sphingomonas donggukensis: M9980_04175
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Entry
M9980_04175 CDS
T08944
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sdon
Sphingomonas donggukensis
Pathway
sdon00550
Peptidoglycan biosynthesis
sdon01100
Metabolic pathways
sdon01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
M9980_04175 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
M9980_04175 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdon01011
]
M9980_04175 (mrdA)
Enzymes [BR:
sdon01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
M9980_04175 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
sdon01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
M9980_04175 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
URW76424
LinkDB
All DBs
Position
complement(859258..861357)
Genome browser
AA seq
699 aa
AA seq
DB search
MIGTGSRIATDAAQGFTFTRRAMMLSGLQIGVGTLLAGRMAWLAVAENEHYSLMSESNRV
NLTLVPPRRGWIVDRHGAPIANNRTDFRVDLIPDRVEDKDRVVGMLTQILALPPDERGRI
DAELKKSAGFRPVQVAENLDWDRFAAVSVRLPELPGVAPTRGFSRNYPAGAAVAHLTGYV
GAATAEQYKETRDPLYVTPGFKFGKDGLERTLEPLLRGKPGAKRIEVTARGKLVRELETR
PDTPGRTVRLTIDAGLQEYAARRLGTNSGSAVVFDCWTGEILAMVSMPAYDPNSFSDGIS
HNEWKMLSEDDHVPLMNKVLQGLYPPGSTVKPMNGLALLEAGVSPAERVYCSGAMRVGNG
IFHCHKRRGHGPLDLQGAIAQSCDIYFYEMIRRLGYDRVAPVARAMGLGQKFDLPFTSQR
YGTVPDSAWKQKKYKTGWTVADSLNASIGQGYVLANPLQMAVMAARLASGRMIQPALLSA
RVDRSPAALPFKPENLALVRQAMAAVVSGGTGGASRLQVPGIEMAAKTGTAQVRRITMAE
RRSGVLSNGQLPFKLRDHAHFICFAPAENPRYAAAIVLEHNGHTVRNLDTPLTGRDIMTY
LFDRDRAMKSLEEVEPTWGGDIRTRMSAQQTAFNAANAPAASSPLPPEDAAAEASNVVDA
AIEASNATTPTTGVAEGRTAELPLEDDAPAGNAQSGDAR
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggaccggctcccgcatcgccaccgacgcggcgcagggcttcaccttcacccgc
cgcgcgatgatgttgtcgggcctccagatcggggtcggcacgctgcttgccgggcgcatg
gcctggctggcggtagccgagaacgagcattattcgctcatgtcggaaagcaaccgcgtc
aacctgacgctggtgccgccccggcgcggctggatcgtcgaccggcacggcgcgccgatc
gccaacaaccgcaccgatttccgcgtcgacctaatccccgaccgggtcgaggacaaggac
cgggtggtcggcatgctgacgcagatcctggcgctgccccccgacgaacgcggacggatc
gacgcagagctgaagaagtccgccggcttccgccccgtgcaggtcgccgagaacctagat
tgggaccggttcgccgcggtcagcgtgcggctgcccgagctgcccggcgttgcgcccacc
cgcggcttttcgcgcaactatcccgccggcgccgccgtcgcgcacctgaccggctatgtc
ggtgcggcgaccgccgaacagtataaggagacgcgcgacccgctgtacgtcacgccgggg
ttcaagttcggcaaggacgggctggaaaggacgctggagccgctgctacgcggcaagccc
ggggcgaagcggatcgaggtcaccgcgcgcggcaagctggttcgcgaactcgagacccga
cccgatacgccggggcgcaccgtccgcctgacgatcgatgcggggcttcaggaatatgcc
gcgcgacgcctcggcaccaactcgggctctgcggtcgtgttcgactgctggaccggggaa
atcctggcgatggtgtcgatgcccgcctacgaccccaacagcttttcggacggcatcagc
cacaacgaatggaagatgctgtcggaggacgaccacgtcccactgatgaacaaagtgctg
cagggcctctacccgccgggatcgaccgtgaaaccgatgaacggcctggcgctgctcgaa
gccggggtgagccccgcggagcgcgtctattgctcgggtgcgatgcgcgtcggcaacggc
atcttccactgccacaagaggcgcggccacggcccgctcgacctgcagggcgcgatcgcg
caaagctgcgacatctatttctacgagatgatccgccgcctgggctacgaccgcgtcgct
cccgtcgcgcgggcgatggggctcggccagaaattcgacctgcccttcaccagccagcga
tacggcacggtccccgacagcgcgtggaagcagaagaaatacaagaccggctggaccgtc
gccgattcgctcaacgcctcgatcggccagggctatgtgctcgccaacccgctgcagatg
gcggtcatggcggcgcggctcgcatcggggcggatgatccagccggcgctgctgtccgcc
cgcgtcgatcgcagccccgcggcgttgccgttcaagcccgagaatctcgccctggttcgt
caggcgatggcggcggtggtcagcggcggcaccggcggcgcctctcggttgcaggtaccg
gggatcgagatggcagcaaagaccggcaccgcgcaggtccgccgcatcacgatggccgag
cggcgcagcggcgtgctgtcgaacgggcagctgcccttcaagctgcgcgaccacgcccat
ttcatctgcttcgcgcccgccgaaaacccgcgctacgccgccgcgatcgtgctcgaacac
aacggccataccgtgcgtaatctcgacacgccgctgaccgggcgcgacatcatgacctat
ctgttcgaccgcgaccgcgcgatgaaaagcctggaggaggtcgagccgacatggggcggc
gacatccgcacccgcatgtcggcgcagcaaaccgcgttcaacgcggcgaacgcgcccgcc
gcgtcctctccgctgccgcccgaggatgcggcggcagaggcgagcaacgtcgtcgatgcc
gcgatcgaggcttcgaacgcgaccacgcccacgacgggggttgccgagggccgcaccgcc
gaattgccgctggaggacgacgcgcccgccggcaacgcccagtcgggcgacgcgcgatga
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