Sphingomonas donggukensis: M9980_04430
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Entry
M9980_04430 CDS
T08944
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sdon
Sphingomonas donggukensis
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdon03016
]
M9980_04430 (truA)
Enzymes [BR:
sdon01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
M9980_04430 (truA)
Transfer RNA biogenesis [BR:
sdon03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M9980_04430 (truA)
Prokaryotic type
M9980_04430 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
URW76472
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All DBs
Position
complement(915118..915864)
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AA seq
248 aa
AA seq
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MTRFALTIEYDGRPFMGWQRQKHGASVQAAIEAAAAAMTGEAVVVHAAGRTDAGVHARGM
RAHLDIARPVTAFRLMEALNALLRPAPVAILDCVTVPDDFHARFSCLARHYEYHIVNRRA
PPTWEKGLAWHVARPLDAAAMAAGAVHLVGRHDFTTFRSAHCQADSPLRTLDRLDVVQSG
DRIVVSASARSFLHHQVRSMVGCLALVGEGRWTPDDMRAALEARDRDALGLNAPPDGLYF
MAADYPAD
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtgactcgctttgcgctgaccatcgaatatgacgggcgcccgttcatggggtggcagcgt
cagaagcacggggccagcgtgcaagcggcgatcgaggcggcggcggcggcgatgaccggg
gaggcggtggtcgtccatgccgcgggacgcaccgacgccggcgtgcatgcgcgggggatg
cgcgcgcacctcgatatcgccaggccggtgaccgcgttccggctgatggaggcgctgaac
gcgctgctccgccccgcgccggttgcgatcctcgattgcgtgacggtgccggacgatttt
catgcgcgtttctcgtgtcttgcgcggcattatgaatatcatatcgttaatcgccgcgcg
ccaccgacgtgggagaaggggctggcgtggcacgtcgcccgtccgctcgatgcggcggcg
atggcggcgggggcggtgcatctggtcgggcggcatgatttcaccacctttcgatcggcg
cattgccaggccgacagtccactccgtacgctcgaccggctcgacgtcgtgcagagtggc
gaccgtatcgtcgtttcggcatcggcgcgatcattcctgcatcatcaggtgcgatcgatg
gtcggttgcctcgcgctggtcggtgaggggaggtggacgcccgatgacatgcgcgccgcg
ctcgaagcgcgcgatcgcgacgcgctcggactgaacgcgccgcccgacgggctctacttc
atggctgcggattatccggccgactga
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integrated database retrieval system
